| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2254 |
|---|
| Symbol | |
|---|
| ID | 8425782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2310916 |
|---|
| End bp | 2312694 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645028374 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003185652 |
|---|
| Protein GI | 258512218 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGGG AGAGCCCATC TTCGTCGCCC AGCTTGAAGT CGCTCGCGCG GCTATTGCCC
TTTGCGTGGC CGTATGCGTG GCAGTTTGTG GGCGTCATGG CGCTCGTCAT CGTGTTCAAC
GCGTCGAGCG TGATGCAGCC GTATCTCGTG AAAATCGCCA TCGACCAGGA TATTTCGAGC
CACCATCCGA ATCCGCGAGG GCTTTTGGAC ATCGCGGCGC TGTACATCGG CGTCGTTGTC
GCGGGCGTCG CGGCGAACTA CCTGCAGATC ACGCTGCTGC AGAGGGCCGG GCAGAGCGTC
ATCCGGAGCA TCCGCGTGGG GCTCTTTCAA CACATCGAGC GCCAGTCCAT GCGCTTTTTC
GACAGCCGCG CCGTCGGCGC GCTCGTCGCG AACGTGTCGA ACGACACCGA GACGGTCAAC
CAGTTCTTCA CCAACTTCTT TTTGAGCATG ATTCGAGACG GCTTGTCCAT CCTCATGATC
CTCATCGCCA TGTTTCGCCT GGACGTGCGC ATGGGCCTCT TTTCGCTCGT GCTCGTGCCT
GTCATCTTCG CCGTCGCCGC GGGCTTCCGA GGCGCGCTTC GGCGCCGCTA CCAGCGCACG
CGCACGCTGC TCGCGAGCAT GGTCGCGTTT CTCGCCGAGA ACCTGGCCGG CATGCGGATC
ACGCAGCTCT TCCGCCAGGA GGCGCGCCAG GCGGAGAAGT TTCGCGACCT CGCCGGGCAA
CATCGGGACG CCAACATCCG GGAGTACTTC ACGTCGGTCT GGTTCAACCG GACCTTTGAG
ATGCTCGGCA ACCTGTCCGT GGCGGCCGTG GTGTACATCG GGGGAACGGC GGTGCTCGGC
GGCACCATCC CGTTTGGCAC CTTGTACGCG TTCATCCGTT ACATTCAGCA GTTCTTCCAA
CCCATCAACG CCATGACGCA GCAGTGGAAC ACGCTCCAGT CGGCCATGGT CGCCGCCGAG
CGCATTGGCC AGATCCTCGA AATGGAGCCC GAGGTGCTGG ATCCCGAGCG CCCCGTCCCG
CTGCCGCCCG ATGCCCGCGG CCGCGTGGAG TTCCGGCACG TCACGTTCGG TTACGATCCG
CGCCATCCCG TCCTGCGGGA CGTTTCGTTC GTCGCAGAGC CCGGATCGTT CGTCGGGATC
GTCGGACCGA CGGGGGCAGG GAAGAGCTCG CTGATGAGCC TCCTGCTTCG TTTCTACGAT
CCCGACGAAG GCGACGTGCT GTTGGACGGG GTGCCGGTGC GATCGCTCGT GCAGGACGCG
CTGCATCGGT TCGTCGGGAT CGTGCAGCAG GAGGTGCATC TGTTCACGGG CACCATTCGC
GACAACATCC GCTTGTTCCG CTCGGACATC TCGGATGAGC GCGTGGAGGA GGCGGCGCGC
GCGGTGGGGG CGGATCGCAT CATCGCGAAA TTGCCGGATG GCTACAACAC CTTCATCTAC
GGTCGGGGCG CCAACCTTTC GATGGGCGAG CGGCAGCTCA TCGCGTTTGC CCGGATTGTC
GCGCTCGATC CGCGTGTGCT GATCCTCGAC GAGGCCACCG CGAACCTCGA CAGCCAGACG
GAGCAGTGGG TGCAGCAGGG GCTCAGGGCG GCGAGCCAGG GGCGCACCAC GCTCGTCATC
GCTCATCGGC TCGCGACCAT TCGCCATGCC GATCAGATTC TGGTGCTCGA TCGCGGCCGG
ATCGTGGAGC GCGGGCGCCA CGACGAGTTG GTGCGGCTCG GGGGATTGTA CGCGAGGCTT
CACGCGGAGA GTGGCGTGGA ATCGCGGCTG TTTTCGTGA
|
|---|
| Protein sequence | MKRESPSSSP SLKSLARLLP FAWPYAWQFV GVMALVIVFN ASSVMQPYLV KIAIDQDISS
HHPNPRGLLD IAALYIGVVV AGVAANYLQI TLLQRAGQSV IRSIRVGLFQ HIERQSMRFF
DSRAVGALVA NVSNDTETVN QFFTNFFLSM IRDGLSILMI LIAMFRLDVR MGLFSLVLVP
VIFAVAAGFR GALRRRYQRT RTLLASMVAF LAENLAGMRI TQLFRQEARQ AEKFRDLAGQ
HRDANIREYF TSVWFNRTFE MLGNLSVAAV VYIGGTAVLG GTIPFGTLYA FIRYIQQFFQ
PINAMTQQWN TLQSAMVAAE RIGQILEMEP EVLDPERPVP LPPDARGRVE FRHVTFGYDP
RHPVLRDVSF VAEPGSFVGI VGPTGAGKSS LMSLLLRFYD PDEGDVLLDG VPVRSLVQDA
LHRFVGIVQQ EVHLFTGTIR DNIRLFRSDI SDERVEEAAR AVGADRIIAK LPDGYNTFIY
GRGANLSMGE RQLIAFARIV ALDPRVLILD EATANLDSQT EQWVQQGLRA ASQGRTTLVI
AHRLATIRHA DQILVLDRGR IVERGRHDEL VRLGGLYARL HAESGVESRL FS
|
|---|
| |