Gene Aaci_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2175 
Symbol 
ID8425697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2235001 
End bp2236947 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content63% 
IMG OID645028289 
Productthreonyl-tRNA synthetase 
Protein accessionYP_003185573 
Protein GI258512139 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCAAG AGGTCACCGT GCGGTTGAAA GATGGATCCG AGCGGCGGGT GCCGGCCGGA 
TCGACGTATG CAGAGCTTGC GCAGTCCATC AGCCCGCGGC TCGGCAAGGA GGCCGTCGTC
GCCCGCGTCA ACGGGGCGCT CGTCGATCTC AGCCGAGAAG TGGAGGACGG CGCGCAGGTC
GAGCTTCTGA CCCTACAGGA TCCCGAAGGG CTGTACGTCA TGCGCCACAC CTGCGCGCAC
GTGATGGCGC AGGCCGTGCA ACGCCTGTTC CCAGGCACCA AGTGCGCCAT CGGGCCCGTG
ATCGAAAACG GGTTCTACTA CGACTTTGCC GATCACGACT TCCATCCCGA GGATCTCCCG
CGCATTGAGG AAGAGATGAA GCGGATTATC GCCGAAGACC TGCCCATTCA CCGAGAGGTC
GTCTCGCGCG AGGAGGCGCT TCGGTTCTTC CGCGATCGCG GCGATCGGTT CAAGGTCGAG
ATCATCGAGG ACCTCCCGGA AGACGTGACG CTCACCCTGT ATCGGCAGGG CGAGTTCGTC
GATCTCTGCC GCGGCCCGCA CCTGCCGTCG ACTGGCCGGA TCAAGGTGTT CCAGTTGCAG
AACTTCGCAG GCGCGTACTG GCGCGGCGAT TCGAAGCGCG AAATGCTCAC GCGCGTGTAT
GGCGTCGCCT TTGCGAAAAA GTCCGATCTC GACGAGTACA ACCGCCTCCA GCAGGAGGCC
CGCGAGCGGG ATCACCGGCG CCTTGGCAAG GAGCTCGAGA TCTTCACGCT GTCGCCCGAG
GTGGGCCAGG GCCTGCCGCT CTGGTTGCCG AACGGGGCCA AGATTCGCCG CATCATCGAG
CGCTACATCG TCGATCTTGA GGAGTCGCTC GGCTATCAGC ACGTGTACAC GCCGCATCTG
GCGAATGTCG AGCTGTACAA GATCTCCGGG CACTGGGAGC ACTACAAGGA CGACATGTAT
CCACCCATGA AGATCGACAA CGAGGAACTC GTGCTGCGGC CGATGAACTG CCCCCACCAC
ATGATGGTGT ACAAGCATCG CCTGCACAGC TACCGCGAGC TGCCGATTCG CATCGCGGAA
CTTGGCACCA TGCACCGGTA CGAGATGTCC GGGGCGCTCG CCGGCCTGCA GCGCGTGCGC
GCCATGACCC TGAACGACGC GCACATCTTC TGCCGCCCGG ATCAGATCGA GCAAGAGTTT
ACCGGCGTCG TTCGCCTGAT CCAGCGCGTC TACAAGGACT TCGGGATCGA CGACTACTAT
CATCGCTTGA GCTATCGCGA TCCGAAGAAT ACCGAGAAGT ACGTGCAGAA CGACGAGATG
TGGGAGCTCG CGCAGAGCAC GCTGCGCAAG GTCATGCTCG ATCTCGGCCT GGAGTTCGTC
GAAGCGGAAG GCGAAGCGGC GTTCTACGGG CCGAAGCTCG ACGTGCAGGT GCGCACGGCG
CTCGGCAAGG ACGAGACCTT GTCCACGATT CAGCTCGACT TTCACCTGCC GAACCGGTTT
AACCTCGAGT ACGTGGGGGA GGACGGCGAA AGGCATCGGC CGGTGGTCAT TCACCGCGGC
GTCGTGGGCA CGATGGAGCG GTTCGTGGCA TTCCTTATCG AGCAGTACAA GGGCGCGTTT
CCGACGTGGC TCGCGCCGAC GCAGGTGGTG GTGGCCTCCG TCGCCGATGA ATTCGCGGGC
TACGCCGAGG AGGTCGCGGC CAAACTGCGC GAGCTTGGAA TCCGCGCCGA GGCGGATGTG
AGCGACAACA AAATCGGGTA CAAAATCCGC CAGGCGCAGA CGCACAAGAT CCCGTACACC
CTCGTCGTGG GCGCGCGCGA GCGCGAGGAG GGCTCCGTCT CCGTCCGCAA GTATCAGGCG
GGCGATCTCG GCGCGATGCC GCTCGATCAG TTCGTGCGGC AGATCCAGGA CGAGATCGAG
CGGAAGGCGA AACTCGTGGA GGGGTGA
 
Protein sequence
MSQEVTVRLK DGSERRVPAG STYAELAQSI SPRLGKEAVV ARVNGALVDL SREVEDGAQV 
ELLTLQDPEG LYVMRHTCAH VMAQAVQRLF PGTKCAIGPV IENGFYYDFA DHDFHPEDLP
RIEEEMKRII AEDLPIHREV VSREEALRFF RDRGDRFKVE IIEDLPEDVT LTLYRQGEFV
DLCRGPHLPS TGRIKVFQLQ NFAGAYWRGD SKREMLTRVY GVAFAKKSDL DEYNRLQQEA
RERDHRRLGK ELEIFTLSPE VGQGLPLWLP NGAKIRRIIE RYIVDLEESL GYQHVYTPHL
ANVELYKISG HWEHYKDDMY PPMKIDNEEL VLRPMNCPHH MMVYKHRLHS YRELPIRIAE
LGTMHRYEMS GALAGLQRVR AMTLNDAHIF CRPDQIEQEF TGVVRLIQRV YKDFGIDDYY
HRLSYRDPKN TEKYVQNDEM WELAQSTLRK VMLDLGLEFV EAEGEAAFYG PKLDVQVRTA
LGKDETLSTI QLDFHLPNRF NLEYVGEDGE RHRPVVIHRG VVGTMERFVA FLIEQYKGAF
PTWLAPTQVV VASVADEFAG YAEEVAAKLR ELGIRAEADV SDNKIGYKIR QAQTHKIPYT
LVVGAREREE GSVSVRKYQA GDLGAMPLDQ FVRQIQDEIE RKAKLVEG