| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2099 |
|---|
| Symbol | |
|---|
| ID | 8425621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2154967 |
|---|
| End bp | 2156976 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645028214 |
|---|
| Product | single-stranded-DNA-specific exonuclease RecJ |
|---|
| Protein accession | YP_003185498 |
|---|
| Protein GI | 258512064 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.339725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTTC CCCTTTGGCG AGCTGCAGGG GTTGGCGATG TCGCGCGCCG GCTGGCCTCC
GTCTTTGAGA TGCCGATGCG CGTGGCGCGC CTGCTTGCGG CGCGCGGTTA TAAGGACCCC
GACGAAGTGC GGCGCCTGCT CACGGCCGAC GAGCCGTGGA GCGACCCGAT GGACTTTACC
GACATGCGCG CGGCGTGTGA GCGAATCCTG CAGGCTGTGA GAAGACGTGA GATCATCGCC
GTGATGGGGG ACTACGATGT GGACGGTGTG AGCGCCGCCG TGATCGTGAC GAAAGCCATC
CAGGCGCTGG GCGGGCGGGT GACGTGCCAC ATCCCAGAGC GCGTGTCGGA CGGCTATGGT
TTCTCGCTCC GCCTGCTCGA GGATGCCAAG AACGAAGGCG CAGCGCTCAT CGTCACGGTC
GACAACGGGA TCCGCGCGGT GGAGGCCATC TCGGCGGCGC TTGCCGACGG CCTGAGTGTC
GTGGTCACCG ATCACCACGA GCCTGGAGAC GAAATCGTCC CCGACGGCGT GCCGGTCCTT
CACTTCACGC GCCACCGAGA TCCTATATCG GCAAAGCGAG GCTGTGGTGC GTTCGTCGCG
TGGAAGCTCG CCATCCAACT GCTTGACGCG GCCGGCGTCC CGAAAGCCGA CGCGTTGCGG
AGATGGCTCA CGGGCCTCGC TGCGCTCGGC ACGCTCGCCG ACATGATGCC GCTCGTGGGA
GAAAATCGCC GGCTCGTGCG CGAGGGTATC CGGGTGCTTG CCACAGAGGG CAGCGCCGGC
TGGCGAGTGC TTTGCGATTG CGCCCGGGTG AGCCGAGATA CCCTCGGTGC GTCCGACGTG
TCCTGGCGCC TGGTTCCGAG GCTGAACGCG GCAGGCCGCA TGGCACATGC CGATCTCGCC
TATCGGTTGT TGATGGAAGA GGATGAAGAG GAGGCGAAGC GCCTCGCCGA AGAGCTGGAG
GTGCTCAACG CGAAGCGGCG GCAGGCCGTG GACGCAGCGT TCGCCGAGGC TGTCGAGGCC
GTGGAGCGGG AGCACGGACC GAATCCTGCA GCCATCGTCG TGGCGGGCGC TTGGCCCCTC
GGCGTGGTGG GGCTGATCGC GGGTCGCCTC GCCCAGACCT ACGCGTGTCC GGCCATCGCC
CTCGCGGACA TGGGCGATGG GACGCTGAGA GGATCCGGGC GTGCGCCCGA AGGCGCGTCG
ATGCTCGACC TTCTCAGTCG GTGTGCGGAA TTCCTCCATC ACTATGGCGG GCACGAGGCG
GCGGTGGGGT GTGGACTCGA CGCGTCTCAA CTGCCGGCGT TTCGTGCGGC GTTGCTCGAG
GCTGCGGTTG CGGCGCGGCC GACTGGCACG GCTGTCGATC CGCCCATGGC CATCGCGGAC
GACTACCTGA TGTTGTCGGA GTCGGCGGAC GAGTTGCTGC TGTGGCTGGA ACGGCTCGCG
CCATTTGGGC CTGAGCACGA GCCGTTTCGA TTCTTCGTAG GTCCCGTCGA GATCGTGCGA
TGCGCGCGGA TGGGGGGCGG AGAACATCTG AGGCTCACTT TGGCGGAGGG CGATGCACAC
CAAGAAGCCG TGTGGTTTCG CGCGCCCGAT AGGATCGCTC GGGATACCAC TGGGCTTTGG
GCGTTCATCG TCGAACTCGT TCCCAATGCG TGGAGAGGAA CCGTCCGCCC TCAACTTCGG
ATTGAGCAAG GCTACCGCCT GCCTCGTGCC GTGTCGAGAG AGGCGTTTGC GGCCGTGTTC
CGATCGCTCA GGCGGGGCCC CTGCACACTC GAAACGCTGC GGCAGCGCGT GAGCGGCATC
TCGGCCGATC TCGACCGGGA CCTCGAGTCC GTGATGGCGA CATTTGTCGA ACTCGGATTT
GCCGCGCTGG AGGGCGGCCT GTATCATGTG ATTGCGAGCG AAAAACGAGA TCTGCGCGAT
TCCCTTGCGT ACCAGGCACT TGTGCGCAGA CATCTGCGGC CGGTCGGCGG CGGGCCGAGT
GAACGAATGG AAGAGGAGAG AACGAGTTGA
|
|---|
| Protein sequence | MSVPLWRAAG VGDVARRLAS VFEMPMRVAR LLAARGYKDP DEVRRLLTAD EPWSDPMDFT
DMRAACERIL QAVRRREIIA VMGDYDVDGV SAAVIVTKAI QALGGRVTCH IPERVSDGYG
FSLRLLEDAK NEGAALIVTV DNGIRAVEAI SAALADGLSV VVTDHHEPGD EIVPDGVPVL
HFTRHRDPIS AKRGCGAFVA WKLAIQLLDA AGVPKADALR RWLTGLAALG TLADMMPLVG
ENRRLVREGI RVLATEGSAG WRVLCDCARV SRDTLGASDV SWRLVPRLNA AGRMAHADLA
YRLLMEEDEE EAKRLAEELE VLNAKRRQAV DAAFAEAVEA VEREHGPNPA AIVVAGAWPL
GVVGLIAGRL AQTYACPAIA LADMGDGTLR GSGRAPEGAS MLDLLSRCAE FLHHYGGHEA
AVGCGLDASQ LPAFRAALLE AAVAARPTGT AVDPPMAIAD DYLMLSESAD ELLLWLERLA
PFGPEHEPFR FFVGPVEIVR CARMGGGEHL RLTLAEGDAH QEAVWFRAPD RIARDTTGLW
AFIVELVPNA WRGTVRPQLR IEQGYRLPRA VSREAFAAVF RSLRRGPCTL ETLRQRVSGI
SADLDRDLES VMATFVELGF AALEGGLYHV IASEKRDLRD SLAYQALVRR HLRPVGGGPS
ERMEEERTS
|
|---|
| |