| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2081 |
|---|
| Symbol | |
|---|
| ID | 8425603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2135555 |
|---|
| End bp | 2136874 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645028196 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_003185480 |
|---|
| Protein GI | 258512046 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.703939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTT CCGTGCAGGT CGCGGGATCA GCCCAGCTTG AACGGCGCAA TCGGTACGTG
GCGCACGGTG TGTCGAATCA GAATCCCGTC GTCATGGTTC GCGCCGAAGG GGCGCGGATG
TGGGATGAAA GCGGCAAGGA GTATATCGAC TTCGCAGGCG GAATTGGGGT GATGAATGTC
GGCCACAGTC ATCCCGAGGT CGTGGCGGCC GTAAAGGCGC AGGCGGAGAA GTTATTTCAC
ACGTGCATCC ATGTGGCGTT GAACGAGCCA TATCTGGCGC TCGCGGAAGC GCTGTGCCGA
ATCGCGCCGA TTTCGGGAGC GAAAAAGGCG TTGCTGTTGA ATAGCGGCGC GGAGGCGGTG
GAAAACGCCG TAAAAATTGC ACGTAGCTAC ACAGGGCGTT CGGCTGTGAT CGCGTTTGAA
GGCGGGTTTC ACGGGCGAAC GATGCTTGGA ATGTCGCTGA CGAGCAAAGT GGATCCGTAT
AAGGTCGGAT TTGGGCCGTT CGTGCCTGAG GTGTATCGGA TGCCGTATCC GAACCCGTAT
CGGCACCCGT TTGGAGCGGG GGATTTGACG GAACAGACTC TTGCATTCCT TCGCCACGCG
TTTGAGACCT ACGTCGACCC GAAACAGGTC GCGGCCGTCA TTGTCGAGCC GGTCCAGGGC
GAGGGCGGAT TCGTCGTTCC GCCGACCGAC TTTCTTCCGA AGCTGCGGGA TCTGTGCGGC
GAACACGGGA TTTTACTGAT CGTGGACGAA GTGCAGACCG GGTTTGGTCG CACGGGACGC
ATGTTTGCTA CCGAGTATGC AGCCGGGCTT GATCCCGACA TGGTGGTGAT GGCGAAGTCG
ATGGGCGGCG GGTTGCCAAT TTCGGCGGTG GTCGGCAAAG CGGACGTGAT GGATGCTCCG
AAGCCCGGCG GGCTAGGTGG AACCTATGGC GGCAATCCAC TGGCGTGTGC AGCGGCGCTC
AAGGTCATTG AAATCATGGA AAGGGATCGC CTGCCGGAGC GCGCCCTCCA AATCGGGAAC
CGGAGCACAG CGTTCCTGCG CGAATTGCAA ACGCGTCACT CGATGATTGG CGATGTGCGC
GGGTTGGGAG CCATGGTGGC GATTGAGTTG GTGAAAGACC GTGAGACGAA AGAGCCATAT
CCGGAAGCTG TGGCACTCAT TAGCAAGAAA TGCCTAGCGT ATGGTCTTGT CACGGTTAAG
GCAGGCGTGT ACAACAACGT CATTCGCCTG CTGTCACCGC TTGTGATTTC CGACGGTGAA
TTGCAGCGGG GACTCGAAAT TTTGGCTCAA GCCATCCGCG AAGCGGAGGC GGAACTGTAA
|
|---|
| Protein sequence | MDTSVQVAGS AQLERRNRYV AHGVSNQNPV VMVRAEGARM WDESGKEYID FAGGIGVMNV
GHSHPEVVAA VKAQAEKLFH TCIHVALNEP YLALAEALCR IAPISGAKKA LLLNSGAEAV
ENAVKIARSY TGRSAVIAFE GGFHGRTMLG MSLTSKVDPY KVGFGPFVPE VYRMPYPNPY
RHPFGAGDLT EQTLAFLRHA FETYVDPKQV AAVIVEPVQG EGGFVVPPTD FLPKLRDLCG
EHGILLIVDE VQTGFGRTGR MFATEYAAGL DPDMVVMAKS MGGGLPISAV VGKADVMDAP
KPGGLGGTYG GNPLACAAAL KVIEIMERDR LPERALQIGN RSTAFLRELQ TRHSMIGDVR
GLGAMVAIEL VKDRETKEPY PEAVALISKK CLAYGLVTVK AGVYNNVIRL LSPLVISDGE
LQRGLEILAQ AIREAEAEL
|
|---|
| |