Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2076 |
Symbol | |
ID | 8425598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2124557 |
End bp | 2128279 |
Gene Length | 3723 bp |
Protein Length | 1240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645028191 |
Product | UvrD/REP helicase |
Protein accession | YP_003185475 |
Protein GI | 258512041 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.692604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGA ACTGGTCGAA GGAACAAGAA CGAGCCATCC GGGCGCGTGG GACGAACCTC GTGGTCTCCG CGGGGGCCGG ATCGGGCAAG ACCGCGGTAC TTGCGGAGCG CATCGCGAGC CTCGCGGAGG GGGATCCGAA GTTCCGGATG GACCAGCTGC TCGTGATGAC GTTCACGGAG GCGGCCGCGG AAGAGATGCG CGCGCGCATC GTGCGCAGGT TGGCCGAACG CGCCGCCGAG GCGGAGCAGG CAGGCGAATC CGTTAAGGCG CGCCGATTCA GCCGGCTGGC GCATCGCGCG AATGACGCCC AGATCTCGAC CATTCACAGC TTTTGTCTCT CTCTCTTGCG CGATCACGCC GTGGAGGCGG GGCTTGTCCC GGGCTTCCGC GTGCTGTCCG GCGAGGAAGA CGCCGTCCTG CTTCGCGGGG CGGCCCAGGC GACGCTTGAC GAATGGGCGC GCCATCTCGA GCGCGGGCCG CAGCTCTGCA CCGCGCTCGC TGCCCTCCGG CTTCACCGGC AGCAGCAGGC GGTGAACGGC GTGCTCGAGT TGTGCCGCGT GGCGCTGAGC CAGGTCGATC CCGGCGGATG GCTCGCCGAG ATCGCGCGGC ATTACGATGC GGACGGCCTG TGGGCGGGTC CGTTCGCCGA GGCGTTCGCC CGCTGGGCAC GCATGAAGGT CGCACGGGCG GTCGAGCACA TGCAGAGGGG CCTGGCGGAG CTCGAGCGCA TGCGGGCGCC GGAGAAGGTC GTGGCGGGCG CGCTCTCCAT CCTCTCGAAT CTCAAAGAAG CGCTCGCGCT CCTTTCGACG CCTGGCGCTC CGCTCGATCC CGACCGCCTC GCGCCGCTCG TCCACTGGGA GTCCGCGCGG CTGTCGAAGG AGTACGAGCC GTTCAAGAAG TGGCGGGGAA AGGCAAACGA AGCTATGAAG CTCCTGCGCA AGGTACTCCG CCGCGGGCGC GCCGCGCTCG AGGCCGACGT GCGGGCCATG CGGCCGCACA TCGAGGTGTT GACAGGCGTT GCCCGCGACA CGCTGGCCCG CGCCCAGTCG CGCCGGCTCG AAGAGAACCG GCTTTCGTTT TCGGACCTGG AGCACCTGGC GCACGAGCTT CTGGCCAAGG ACGAAGGGGT TCGCGCCGCG CTTCACGCGA GATACCGGTA CGTGTTCGTG GACGAATACC AGGACACGAG CCCGATTCAG GACGCCATCG TCGACGCCGT CGCGCCGCCG GGGGGGCTGT TCCTCGTGGG CGACGTGAAG CAGAGCATCT ACGGCTTTCG CATGGCGGAG CCCGGGCTGT TTCTGGCCCG ATACCGCAGG TACGCCGAGA AGGACGGCGG CGAGGCCATC GACCTTTCGG CCAACTACCG CAGCCGATCC GGCATCGTCC GCTTTGTCAA CTACCTGTTC GGGCAACTAT TTCACGCGGA CGTCGCAGGG TTCGACTACG CGGACGGGCA CGAGATGAAG CCCGAGGCGG CCTATCCAGA CGACGATGGC GGGCCGTGTC CCGTCAAGAT CAAGCTGTTC TTTTCCGGGG ACGCCGGCAA CGATCGGGTT GAAGAGACCG AGGAGCCTGA GCGCGCGGAC GCGAAGGGGG AGGACGAGGA CGAACAGGTG GCCCGCGAAA AACTCGAGAT CGAGGCCATG TGGGTCGCGG ACCAGATTGC CCGCGCGTTG GAGCGGCAAG AGAGGGTGTA CGATCGCGCG GCCAAGGCCT ACCGGCCGCT GCGTTACCAG GACGTGGCCA TCCTGCTTCG CGCGGGGGGC GAGAATCTGA ACACCGTCGT GCAGGTGCTC GCGTCCCGCG GCATCCCTGC GGTGGCGCGC TCGTCAAGCG GATTTTTTCG CGCGATGGAG ATCCGCTGGG CCGTTTCCTT GCTCACTGCG CTCGATAACC CGCTCGACAG CCTGGCGCTC GCCGCGGCGT TGAAATCGCC GTTTGTGGGT TTGAGCGACG ATGACCTCGC CGCCGCGCGG ATCGCATGCC CGCGCGGACC CTTGTGGCAC GCGGTGCGGG AGGCCGCGCG AGACACGGAG GGCGCGCGCG ACGCACTGCG CCTGGCCGTG GAGCGGTTGG AGCGCTGGCG CGGCCTCGCC CACACGCTGG CACCGGGGGA TCTGCTGCGC GAGATCGCCC GTGAGGTCGA GATCGACCTG TATCTCCGCG CCATGCCGCG GGGACTGGCC CGCGCGGCGA ACCTCGAGCA ACTGATTCGC CTGGCGCAGT CTCACGCGCC TCACGCGGGC GATCTCTACC GTTTTCTCGC CATGGTTCGG GGGCTCGAGG AAGCGGACGT CGATCTCGGC CACGCGCACG GGGCGAGCGC GGACAGCGTG GCGGTCATGA CGATTCACGG CTCGAAAGGG CTCGAGTTTC CGCACGTGTA CGTGCTCTGC CTCGGCCGCC AGTTTCCGCA CAACAAGCGC ACCCTCGCGC TGCATCGCCG CCTGGGCATT GGTGCGACGA TGTGCGATGT CCAGACGGGC GTGCACTGGC GGACCGTTCC CTCCATCGCC GTGGACCAAG CCAACCTCGA GGCTTCGCGC GCGGAGGAGG CCAGGGTCCT CTACGTCGCG CTCACGCGGG CGAAGGAGCG CCTCGTGCTC GTGGGACACG CGGGCAAAGT GGCGAAGCTC GCGGATGCGG CCGAAGGCCA CGACGATGAG GGACGCCTGA CGCCCGAGGC CTTCCTCAAA GGGAACTCCT ATGCATCCTG GATCCTGCCT GCGCTCATGC GCCATCCCGA CGGCGCGTGG CTCAGGAAAG AGGCGGGTGA CGCTCGCGCC GCCCTGTTGG ATGCGCCCGG CGTTCGGTTC GAGCTCGAGG TCGAGGTGGA CGGCAGGCCG CAGGGACAGG AGAGCGGCGA GCCGCGCTCG TCCTTGTTCA AAGCGCCGCT GCCGCCCGCG GAGGAGGTGG AGCGCGAGCT TCGCCGCCTG TGGCAAGGCC CAGCGTGGCG GTATCGCGCT GTGCGGGTCG CGTCGGAGCA GAGAGGATCT CGCGTTTCGC TGCCGAGCAA GCTCACCGCC ACCGACATCC GGCGGCTGTT TGCCGAGCGA GAGCTACGGG CGCGCGGCCG CCACGCGGGG TCGGTGCTGG AGGATCCGGC CTTCGTCCGC CAGAGCGGCG CGTCGCCCCG CGAGCGAGGC GTGGCGTTTC ACGCGTTCAT GCAGCGAGCG CCTATGCAAC CTTACGCGAA CCCGGATGAC GTGAGGCGCG CGGCGCAGGC GCTCTTGGAG CAGGGGCTTC TGGACGAGCG CATGGCGTCC GCACTTGATC CCGACGACGT CCTTGCGTTC TTCGCCTCTC CATTGGGGCG CCGCGTCCTC GCGGCGGGCG AGGTGTACCG CGAGCAGCCG TTCTTCTACC GACTGGATGT GCGCGCGGGT GACGCGCAGG CGCCGGTGGT GGTCCAGGGC GTGATCGACT GCTTGATTCG GGATGCGCGC GGATATGCCG TGATCGACTA CAAGACGGAT CAGGTGAGGG ATGCGTCCGA TCTCGACCGG TTGGTGCGGG CATATGAGCC GCAGGTCGCG ACATACGCCG CGGCGGTCCG CGAGGCGGTT GGGACGGAGC CGGAGGTGTA TCTGTACTTC GTTCACGCGA GAGAAGCTCG TTCGACCATG CCAAGCCCGC TGGGGACCAG GCTGGAGCAA TGGGCGCAGC GCCCGACCAG CGGATTCCCC CTTTCACCTG ACTTAGGCAT GAAGAGGGTG TAG
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Protein sequence | MSVNWSKEQE RAIRARGTNL VVSAGAGSGK TAVLAERIAS LAEGDPKFRM DQLLVMTFTE AAAEEMRARI VRRLAERAAE AEQAGESVKA RRFSRLAHRA NDAQISTIHS FCLSLLRDHA VEAGLVPGFR VLSGEEDAVL LRGAAQATLD EWARHLERGP QLCTALAALR LHRQQQAVNG VLELCRVALS QVDPGGWLAE IARHYDADGL WAGPFAEAFA RWARMKVARA VEHMQRGLAE LERMRAPEKV VAGALSILSN LKEALALLST PGAPLDPDRL APLVHWESAR LSKEYEPFKK WRGKANEAMK LLRKVLRRGR AALEADVRAM RPHIEVLTGV ARDTLARAQS RRLEENRLSF SDLEHLAHEL LAKDEGVRAA LHARYRYVFV DEYQDTSPIQ DAIVDAVAPP GGLFLVGDVK QSIYGFRMAE PGLFLARYRR YAEKDGGEAI DLSANYRSRS GIVRFVNYLF GQLFHADVAG FDYADGHEMK PEAAYPDDDG GPCPVKIKLF FSGDAGNDRV EETEEPERAD AKGEDEDEQV AREKLEIEAM WVADQIARAL ERQERVYDRA AKAYRPLRYQ DVAILLRAGG ENLNTVVQVL ASRGIPAVAR SSSGFFRAME IRWAVSLLTA LDNPLDSLAL AAALKSPFVG LSDDDLAAAR IACPRGPLWH AVREAARDTE GARDALRLAV ERLERWRGLA HTLAPGDLLR EIAREVEIDL YLRAMPRGLA RAANLEQLIR LAQSHAPHAG DLYRFLAMVR GLEEADVDLG HAHGASADSV AVMTIHGSKG LEFPHVYVLC LGRQFPHNKR TLALHRRLGI GATMCDVQTG VHWRTVPSIA VDQANLEASR AEEARVLYVA LTRAKERLVL VGHAGKVAKL ADAAEGHDDE GRLTPEAFLK GNSYASWILP ALMRHPDGAW LRKEAGDARA ALLDAPGVRF ELEVEVDGRP QGQESGEPRS SLFKAPLPPA EEVERELRRL WQGPAWRYRA VRVASEQRGS RVSLPSKLTA TDIRRLFAER ELRARGRHAG SVLEDPAFVR QSGASPRERG VAFHAFMQRA PMQPYANPDD VRRAAQALLE QGLLDERMAS ALDPDDVLAF FASPLGRRVL AAGEVYREQP FFYRLDVRAG DAQAPVVVQG VIDCLIRDAR GYAVIDYKTD QVRDASDLDR LVRAYEPQVA TYAAAVREAV GTEPEVYLYF VHAREARSTM PSPLGTRLEQ WAQRPTSGFP LSPDLGMKRV
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