| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2047 |
|---|
| Symbol | |
|---|
| ID | 8425569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 2096551 |
|---|
| End bp | 2097435 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645028164 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003185448 |
|---|
| Protein GI | 258512014 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.550241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGA AGGCTCGAAG AACGCTCACG GCGTACCTGA TGCTGTTTCC GACGCTCGCC
CTCTTGGCCG TGTTCACACT GTACCCAATC GTCGAATCCT TCGTGATCAG CTTCTTTCAC
TGGGACATGA TCAGTCCTCA CAAGCAATTT GTGGGCTTTC AAAATTACGT TCAAATTTTT
AAGGACCCGC TGTTTCATCG CGCGGTCGTC AATACGCTGC TGTTTGTCGT CCTGTATGTT
CCCATCGTCA TGGCCCTGGG ATTGGCGGTG GCTCTCCTGC TGAACGCGAA AATTCGTCTG
CGGGGATTCT TCCGGACAGC CATCTTCCTT CCCTACGTGA CGTCCATTGC GGCGACGGGC
ATCATATGGC AGTGGATTTT TAACGACCAG TTCGGTTTGC TGAATGACCT CCTCCGCCAG
GTCGGCATCC AGGGGCCCGA CTGGCTCAAC ACGCCGCAGG ACACGATGAT CTGTCTCGTC
ACGCTGAGCG TGTGGCAGAG CTTGGGCTAC GTTTCCGTCC TGTTTCTCGC AGGTTTACAG
AACATCAGCC GCGAGTACTA CGAAGCCGCA CGCGTCGACG GAGCGCACGG CTGGGACCTC
TTCCGACACG TCACATGGCC GCTCCTCTCC CCGACGACGT TCTTCGTGCT GTTGATGAGT
ACCATCGAAG CCTTCAAGGT GTTTCTTCCC GTGTACGTCC TGTACGGCGC GACCGATGGC
CCCAACGACA GTGGTTTGAC CATGCTGTAC TACATGTTCA CAGAAGGGTT CAGCGATTAC
CGGATGGGCT ACGCGAGCGC ATCCGCCTAC ATTCTCTTTG TCATCATCCT CGCGTGCACG
CTCCTGCAGA TGACGCTGCA GCGGCGCGTC CACTACGAAT CCTGA
|
|---|
| Protein sequence | MTLKARRTLT AYLMLFPTLA LLAVFTLYPI VESFVISFFH WDMISPHKQF VGFQNYVQIF
KDPLFHRAVV NTLLFVVLYV PIVMALGLAV ALLLNAKIRL RGFFRTAIFL PYVTSIAATG
IIWQWIFNDQ FGLLNDLLRQ VGIQGPDWLN TPQDTMICLV TLSVWQSLGY VSVLFLAGLQ
NISREYYEAA RVDGAHGWDL FRHVTWPLLS PTTFFVLLMS TIEAFKVFLP VYVLYGATDG
PNDSGLTMLY YMFTEGFSDY RMGYASASAY ILFVIILACT LLQMTLQRRV HYES
|
|---|
| |