Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2045 |
Symbol | |
ID | 8425567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 2093778 |
End bp | 2094992 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645028162 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003185446 |
Protein GI | 258512012 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.588816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTTCCAT CCAAATCGCC TGGCCATCAC GTCTATATCG CGCGAGGCAC GCCGATCTAC CGGCGCGTGA GCATCGCCTT CCTCGCCGCA GGGCTCGTGA CCTTCGCCAA CCTGTATGCG GTGCAGCCGC TCATTCCCGC GTTCAGCTCG GATTTCGCGC GATCGCCAGC GGCCGCGAGT CTGGCGCTCT CCGCTTCGAC CTTTACGCTC GCCCTGTCGC TGCCCATCTT TGCGTCTTTG TCCGACCGAT TCGGCCGAAA GCCCATCATG TTGTTCTCCC TGTTCTCCTC GTCCGTCCTC CAATTCGCGG TGGGCCTCGT GCCGACGTTT TGGGGGATCG TCGCCGCGCG GGCCTTGGAG GGATTCACGC TGGCCGGATT GCCGGCCGTG GCCATGACGT ACCTGAGCGA GGAGATCGAC TCGTCGAGTC TGGGCTTTGC GATGGGCCTC TACATCAGCG GCAATACGCT GGGCGGGTTA CTCGGGCGCG TGCTCATCAG CCTGGTGGCC GATGGCGCCT CGTGGCGAAT CGGGATGATG GCGTTCGGGG CGGTGAGCCT GGCGCTGAGC GCCTACGTGG CTTGGTCGCT TCCGGCGTCG CGGCACTTTG TGCCAAGAAG GGATCGCGTC CAGGACATCC TGTCCCGCTT CGCGCACGCG GTGAAGCGGC CGGAACTGGA CGCCCTGTAT CTCGTGGGCG GGCTTCTCAT GGGCGGATTC GTGTCCCTCT ACACGTACAT GGGATTTCGC CTCGCTGGCG CGCCTTATCA CCTCTCGACT TCCGTCATTG GCCTCCTGTT CTTCGCCTAT CTGGCGGGCA CGTTTAGCTC CTCGTTCATG GGGAGCCTGG CGGATCGAAT CGGACGCCAT CGCGTGCTGC CGCTGAACAT CGCCATCATG GCCGCCGGCG CAGCGCTCAC CTGCGCGCGA GGCCTTGCCG CGATCGTCCT AGGGATGGTG GTGTTCACCT TCGGCTTTTT CGGCGCACAT TCCACCGCCT CGTCGAGCGT CGGCAGCCTG GGCGGTGCGC ACCGAGCGCA GGCGTCGGCT TTGTACCTCT TCTGTTACTA CACTGGATCC AGCGTCATCG GATCCTTGGG CGGCTTGTTC TGGACGGACA TGGGCTGGCG CGGCGTCATC GGCATGATCT TGGCCGCGCA GGCGGCAGCC GCCCTCGCCT TTCTTTTCGC CAAACGAAAA TTGAGTACCA CATGA
|
Protein sequence | MLPSKSPGHH VYIARGTPIY RRVSIAFLAA GLVTFANLYA VQPLIPAFSS DFARSPAAAS LALSASTFTL ALSLPIFASL SDRFGRKPIM LFSLFSSSVL QFAVGLVPTF WGIVAARALE GFTLAGLPAV AMTYLSEEID SSSLGFAMGL YISGNTLGGL LGRVLISLVA DGASWRIGMM AFGAVSLALS AYVAWSLPAS RHFVPRRDRV QDILSRFAHA VKRPELDALY LVGGLLMGGF VSLYTYMGFR LAGAPYHLST SVIGLLFFAY LAGTFSSSFM GSLADRIGRH RVLPLNIAIM AAGAALTCAR GLAAIVLGMV VFTFGFFGAH STASSSVGSL GGAHRAQASA LYLFCYYTGS SVIGSLGGLF WTDMGWRGVI GMILAAQAAA ALAFLFAKRK LSTT
|
| |