Gene Aaci_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2024 
Symbol 
ID8425546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2068872 
End bp2069306 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID645028141 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_003185425 
Protein GI258511991 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.330713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTG ATTTCGGCGA GCGGCGGATC GGCGTCGCCT TGTCGGACCC CATGGGGCTC 
ATCGCACAGC CGTACGGCGT GATCGAGCGC CAATCCGATC GGCAGGCGGC GGACGAAGTG 
GCAGATCTGG CGCGGCGAGA AGAGGTGGGG CGGATTGTCG TCGGGCGGCC GCTCCACATG 
TCGGGCCAGC CTTCCGAGAT GACGTCGCGC GCGGAGAAGT TCGCCCGCAT GCTGGCGGCG 
CGCACGGGCC TGCCGGTCGA TCTGTACGAT GAGCGGTTGA CCACGGTGAG CGCGGAGCGC 
ATCCTCATCG AGCAGAACGT GCGGCGCAGG GAGCGCCGCG CCACCGTGGA CGCTGCCGCG 
GCGCAGGTCC TGCTCGAGGA TTATCTGCGA TCACGTCAGC GGGCGGACGG CGAGGACGCG 
GAATTCGAAG GTTGA
 
Protein sequence
MAIDFGERRI GVALSDPMGL IAQPYGVIER QSDRQAADEV ADLARREEVG RIVVGRPLHM 
SGQPSEMTSR AEKFARMLAA RTGLPVDLYD ERLTTVSAER ILIEQNVRRR ERRATVDAAA 
AQVLLEDYLR SRQRADGEDA EFEG