Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2003 |
Symbol | |
ID | 8425525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 2051432 |
End bp | 2052085 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645028120 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003185404 |
Protein GI | 258511970 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGGAG ACCTGGTGGT GTGGCCCATG TCCGCAAGCG GCGTCGCCTA TGCGTCCACG CCGAGCCCGG GACCAAGCGG CCCGCCCGAC GCGGAGCAAT CGTTCGCCGA TGCCCTTGCC CTGTACGCCA ACGCGCTTGG TGCCGAATGG CCAAACGCGG TCACCGCCCA AGCCGCGCAG CCGGAGGCAG CGGCCATGCC AAACACGGCG ACCGATGACG GAGCGTGGCC CAACTGGGGG ACGGCACTTT CTCCCGCCCC TGCCGAAACC GAGCAGAACG GTTCGCTCGA GGCGCTCATT CGCCAGGCGG CGGACAAATA CGGCCTGCCG CCGGCCTTGC TCCAGGCCGT GATCGAACAG GAGTCGGGGA GCAACCCGAA CGCCACCTCC CCCGCGGGCG CGATGGGCCT GATGCAGCTC ATGCCCGCGA CGGCGGCGGC GTATGGCGCC ACGCAGCCAT ACAATCCGGC CGAGAACATC GACGCGGGCG CCCATTACCT CGCCGACCTT TTGGCGCGGT ATCAGGGCAA TGTCGCGCTG GCGCTCGCCG CGTACAACGC GGGCCCGGGA GCGGTGGACG CATACGGCGG CGTGCCCCCG TATCCCGAGA CCCAGGCCTA CGTGCGCGCC GTCCTCGCAA AGGCCGACCT GTGA
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Protein sequence | MSGDLVVWPM SASGVAYAST PSPGPSGPPD AEQSFADALA LYANALGAEW PNAVTAQAAQ PEAAAMPNTA TDDGAWPNWG TALSPAPAET EQNGSLEALI RQAADKYGLP PALLQAVIEQ ESGSNPNATS PAGAMGLMQL MPATAAAYGA TQPYNPAENI DAGAHYLADL LARYQGNVAL ALAAYNAGPG AVDAYGGVPP YPETQAYVRA VLAKADL
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