| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1999 |
|---|
| Symbol | |
|---|
| ID | 8425521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2046996 |
|---|
| End bp | 2048162 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645028116 |
|---|
| Product | oxygen-independent coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_003185400 |
|---|
| Protein GI | 258511966 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.865362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGATC GGGAGGAGCA CCGCGCGCCT CAGTCTTTGT ACGTGCACAT TCCTTTTTGT
AAGAGCCGCT GTTTCTACTG CGATTTCACG ACCTTCGTGA AGTCGCCCGC CGCGATGGAG
GCGTACGTCG ATGCGCTTGT CGCGGAATGG GACCTGATGG AGCCCTTGGA GGCCCCGCTC
GCCACAGCCT ACTTCGGCGG CGGCACCCCG ACGCTCTTCT CCGCTTCACT CCTCGACCGG
CTGTTGGACG CCATGCGGCA GCGCTTCGAG TTTTGCGCGG ACGCCGAGAT CACGTTCGAA
TCGAATCCGG ACTCCATCAC CCGGGAAAAG CTCCGCGTGC TCCGCGATCA CGGCGTCAAC
CGCATCTCGT TCGGCGCGCA GGCGTTCCAA GACCATCTGC TGCAGGCCAT CGGCCGCGCG
CATCTGCGCG ACGCGATCGA AGAAGCCGTC TGGGCCGCAC GCGATCTCGG CTTTCCGCAC
GTGAATATCG ATCTGATGTT TGGGCTGCCA GATCAGACCC TCCACGACGT GGCGGAAAGC
GTCGAAGCGG TCCTTCGTCT TCCTGTCGAT CACGTCTCCG CGTACTGGCT CAAGATCGAA
CCGGGCACGC CGTTCGCCAA GTGGCACGAG ATGGGCCTGC TCAGCCTGCC CGGCGAAGAC
GCGGAGGCCG ACATGTACCG TCTCGTGCGC GATGTCCTGC GCGACGCCGG ATTTGTCCAC
TACGAGATCT CCAACTTCGC GAGGCCCGGC GGCGAGGCCC GGCACAACCT CGTGTACTGG
CGCAACGAGC CCTATTGCGC GAGTGGGGTC GGCGCGCACG GGTACGCCCG CGGCGAGCGG
TACGCGATGG AGCGACGCTT CTCCGCCTAT CTGGCCGCCG TGCGCGAGGG GCGAAGGCCC
GTGTCCGCGC GGCAACGCGT GCCGGTTGCC GAGCGCGCGG AAGACCAGGT GATCCTCGGG
CTGCGCCTGG CGGAAGGCGT GGACAGGCAG CGCTTCGAGC GCCGATTTGG GCGGACTATC
GAGGACGTGT TTCCGGGCGT GGTCGAGCGA CTCCTGGCCG AGGGCTTGCT GGAGCGGCGA
GGCTCGGCGT ACCGCATCCC GGACGCCTAT TGGCCCATCG CGAACGCCAT CTTTGAGCAG
TGGATTGGGG CGGCCGACAT CCATTGA
|
|---|
| Protein sequence | MEDREEHRAP QSLYVHIPFC KSRCFYCDFT TFVKSPAAME AYVDALVAEW DLMEPLEAPL
ATAYFGGGTP TLFSASLLDR LLDAMRQRFE FCADAEITFE SNPDSITREK LRVLRDHGVN
RISFGAQAFQ DHLLQAIGRA HLRDAIEEAV WAARDLGFPH VNIDLMFGLP DQTLHDVAES
VEAVLRLPVD HVSAYWLKIE PGTPFAKWHE MGLLSLPGED AEADMYRLVR DVLRDAGFVH
YEISNFARPG GEARHNLVYW RNEPYCASGV GAHGYARGER YAMERRFSAY LAAVREGRRP
VSARQRVPVA ERAEDQVILG LRLAEGVDRQ RFERRFGRTI EDVFPGVVER LLAEGLLERR
GSAYRIPDAY WPIANAIFEQ WIGAADIH
|
|---|
| |