| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1939 |
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| Symbol | |
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| ID | 8425460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 1990691 |
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| End bp | 1992304 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645028055 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003185340 |
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| Protein GI | 258511906 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.926976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGCTT CGTATGAGGT GCAGAGGACG AATCAGATCA CCGGGTCGCG CAAGTGGTGG
GCGTTTGCCA CCGTGCTCGT GACCATGTTC TTCTCGTCGC TGGATCAGAC CGTCGTGTCC
ACGGCCATGC CGACGGTCAT CAGTGATTTG CACGGGCTGA ACCTGTACAC GTGGGTGTTC
ACTGCGTACA TGATCACGTC GTCCATCACG GTGCCCATCT ACGGAAAGCT GTCGGACGTG
TTTGGGCGTA AGCCGTTTTA TTTGTTCGGG CTTGTGATGT TCGGCATCGG ATCCGCCATC
TCGGGCCAGG CCCACAGCAT GTTGGAACTC GTCTGGGCCC GCGCGGTGCA AGGCGTCGGC
GCCGGGGCCA TGATGAGCAT GCCGCGGGCA ACCATCGGCG ACATCTTTTC GCCGAAGGAG
CGCGCGCGTT GGATGGGCGT GATGATGGCC GTGTTTGGGC TCTCGAGCAT TGTCGGGCCG
GCCATCGGGG GGTTCATTAC AGATGACTGG TCTTGGCGAT GGGTGTTTTA CGTCAACCTG
CCGTTTGTCG TCGTCGCCAT CGTCGGCGTC GTGTTCGCGC TGCCCACGGT TCGGACGAAG
GATCAGGTCA AGGTCGACTG GCAGGGGGCG GCGCTCCTCA CCGTCGGCCT CGTGCCCATC
CTGCTCGCGC TCACCTGGGC GGGGAGCAAG TACGCGTGGG GCTCGTTTGA AATCGTCGGT
ATGCTGGCGG GCGGCGCGCT GGTCCTGGTG GCGTTCGTCG TCTGGGAGAT GCGCGCGCCG
GATCCGCTCG TTGCGCCGTG GTTGTTTCGC AACCGGGTGT TCACGACGTC GCTCGTGCTG
CAGCTGCTCG TGGGCATGGC GATGTTCGGA AGCCTCATGT ACCTGCCCAT CTTCGTGCAG
GGCGTGATTG GGCTGAACGC GCAGAACAGC GGTTGGGTCA TGACGCCGAT GATGGGCGGG
TTCATGGTCG GCAGCATGGT TTCGGGGCAG GTGATGTCGA AGACGGGCCG GTACCGCCAT
GTGGCGTGGA TCTCGGGTGC CGTGATCGTC GTGGGTTCGG TTCTGTTGAA TCGGGTCGAC
GTTCACACGT CGTGGCCGAC CATCATGGTG GACATGGTCG TCCTGGGCCT TGGCATCGGC
GCCTTGATGC CGCTCATGAA CATGGCGGTG CAAAACGCGT TTCCGTACCG CGTGATGGGG
ACGGTGAACG CGAGCCAGCA GTTCGTGAGT TCGCTCGGCG GCGTCATTGC GTCGCCCGTG
TTCGGAACGG TGCTGAACCA CGCGTTCTCG CGCAAGCTTG GTGAACTGCT GCCGCCTTCC
CTGTCGGCGA TGAGATCGAA GATGGGATCG CTCAACCCGC AGGCGCTCCT CACGTCGCAG
GCGCAGAAGG CCATTGCCGC CGAGTTCGAC CGGCTCGGCC CGGCTGGGCA GGCGCTGTAC
CACCAGCTCA TGCAGGCGGT CAAGCTGTCG TTGACGTACG GGATCCAGCA GCTGTTTTTG
GTCGGGTTGG TCTTTTCCGC GCTCACGTTC ATCGGCACGT TCTTCCTGCC GGAAGTGAAA
CTGAAGGGCG AGGAGTATTT TCGCAGCGAA GAGACAGAGA AACACGCGGG ATAA
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| Protein sequence | MSASYEVQRT NQITGSRKWW AFATVLVTMF FSSLDQTVVS TAMPTVISDL HGLNLYTWVF
TAYMITSSIT VPIYGKLSDV FGRKPFYLFG LVMFGIGSAI SGQAHSMLEL VWARAVQGVG
AGAMMSMPRA TIGDIFSPKE RARWMGVMMA VFGLSSIVGP AIGGFITDDW SWRWVFYVNL
PFVVVAIVGV VFALPTVRTK DQVKVDWQGA ALLTVGLVPI LLALTWAGSK YAWGSFEIVG
MLAGGALVLV AFVVWEMRAP DPLVAPWLFR NRVFTTSLVL QLLVGMAMFG SLMYLPIFVQ
GVIGLNAQNS GWVMTPMMGG FMVGSMVSGQ VMSKTGRYRH VAWISGAVIV VGSVLLNRVD
VHTSWPTIMV DMVVLGLGIG ALMPLMNMAV QNAFPYRVMG TVNASQQFVS SLGGVIASPV
FGTVLNHAFS RKLGELLPPS LSAMRSKMGS LNPQALLTSQ AQKAIAAEFD RLGPAGQALY
HQLMQAVKLS LTYGIQQLFL VGLVFSALTF IGTFFLPEVK LKGEEYFRSE ETEKHAG
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