Gene Aaci_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1899 
Symbol 
ID8425420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1947197 
End bp1948183 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content59% 
IMG OID645028015 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003185300 
Protein GI258511866 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.227474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATATT TCCTAAATCG ATTTTGTTTT CTCGTCTTGT CGCTTTGGGC GGCTATCACG 
CTGAACTTCA TCCTGCCGCG CCTCATGCCC GGCAACCCTG CTCAGGCGAT GATCGCTAAG 
CAGGCCGGGA ATATCAATCC TGCCGCACTG AAAGCCATTG AGGAGCAGCT CGGGCTGTCA 
AATGGTCCCC TGTGGCAGCA GTATTTTCAG TACCTCGGAA ATCTGTTGAC AGGGCACTGG 
GGCGCTTCGT TTCAGTACTT TCCGACCCCG GTCGTCAACA TCATTGAGAC GAGCCTGCCG 
TGGACCATCG TGCTGCTCGG CGTGGTGACC ATCATCTCCG TGGTCGTCGG AACGCTCATC 
GGCATTCTCA TCGCCTGGCG CCGCGGCGGA ACCGCGGACA ACGTGATCCC GGTAGCCACG 
ATGTTCGGCC AGGCCATCCC GACCTTCTGG CTCGGCCTCA TTCTCATCTA CTTCTTCGGG 
TTCGTGCATC ACTGGTTTCC GCTCGCGCAC GGATACGGAG ACGACGTGAC GCCGGGGCTC 
AACGCTCCGT TTCTGGCGAG CGCGGTCTAC CACAGCATCC TGCCGGCGGT GGTGGTGTTC 
GTCGGCAGCA TCAGCGGCTG GATCGTGGGC ATGCGCAACA ACATGATCAC GACGCTCGGA 
GAGGACTATG TGGTCTTCGC CGAGGCCAAA GGGGTATCGA AGCGGAGGCT CATTTTTTCG 
TACGCCGCGC GCAATGCGCT CCTGCCTCAG TTGACCTCCG TGGCCATCGC GCTCTCGTCG 
ATCATCGGCG GGCAAATTCT CATTGAACAA GTGTTTTCCT ACCCAGGCAT CGGATACGGC 
CTGACCAACG CGGTGGCGAG TGAAGACTAT CCGCTCATTC AAGGGATGTT TCTCATCATT 
GCGGTGACAG CGCTTGTGAT CAACTTCATT GTCGACATGC TGTACGGACG GCTCGATCCG 
CGCGTGCGTA GAAGGGGGGC GGCGTGA
 
Protein sequence
MRYFLNRFCF LVLSLWAAIT LNFILPRLMP GNPAQAMIAK QAGNINPAAL KAIEEQLGLS 
NGPLWQQYFQ YLGNLLTGHW GASFQYFPTP VVNIIETSLP WTIVLLGVVT IISVVVGTLI 
GILIAWRRGG TADNVIPVAT MFGQAIPTFW LGLILIYFFG FVHHWFPLAH GYGDDVTPGL 
NAPFLASAVY HSILPAVVVF VGSISGWIVG MRNNMITTLG EDYVVFAEAK GVSKRRLIFS 
YAARNALLPQ LTSVAIALSS IIGGQILIEQ VFSYPGIGYG LTNAVASEDY PLIQGMFLII 
AVTALVINFI VDMLYGRLDP RVRRRGAA