Gene Aaci_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1875 
Symbol 
ID8425395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1924132 
End bp1925166 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID645027990 
Productcell envelope-related transcriptional attenuator 
Protein accessionYP_003185276 
Protein GI258511842 
COG category[K] Transcription 
COG ID[COG1316] Transcriptional regulator 
TIGRFAM ID[TIGR00350] cell envelope-related function transcriptional attenuator common domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCGAC ACGGTCGGCG TTTGGCGTGG GTGGCCGTGG CTGCCGCGGC GTTCGGAGCC 
TGGCACGCCT GGCCTCGGCC GGAAAGGCCG CATGCGCACG CGCATGGCTC GCACTCGGTC
GCGCCGTCTT CCGCCAGTTG GACCGCCACG GACCCAGGCA CCACGCGGCT TGGGGGGCGC
GAGACGATTC TCGTCTTGGG CAGCGACAAG CGCCCGGAAG ACCCGCGCGG GAATGCCGAC
GTGCTCCTCG TCGCGAGCCT CGATGACAGC CATCGCCGCA TTGAACTCCT CTCCATCCCG
CGCGACACCC AGGTGGCTTT CCCGGACGGC CGCTATCACA AGATCAATGA AGCCCTGGCG
AGCGGCGGGC CAGAAGAGAC CTGCATGCTG GTGGAGCGCT TGATTGGTCT CCCCATCGAC
CATTACGCCA TCATTCGATT CGATGCGCTC GTGCATATGG TGGATCGCAT CGGCGGCCTC
GACATCGATG TGCCGCGCAA CATGGATTAC CGCACGGGCG ACAAGGTGTA CGGCGTCATT
CGCTTGCGGA AAGGCCGGCA TCACCTGAGC GGCGAACAGG CGCTCCAATT TGTCCGCTAC
CGCCACGACG CGCTCGGCGA CATTGGGCGC ACCGAGCGAC AGCAGGCGTT TCTCGTGGCG
CTGAAGGATC AGCTCCTTCG CCCTCAAACG CTGCCCCGGC TGCCCGAAGT GGCATTCGAC
GCGTGGAAGA TGATCGACAC CGACATGTCC CTCGGCGACA TTTCGCGGCT GGCGGCGCGC
GCGCCGCAGT ACAAGACGTA CCGGACCGTG CACACCACCC TGCCGGGCTC CTTTCACGAT
CCCGACCCGT CCATCCCGGG AGACTTGAGC TACTGGGTGG TCAATCCGGC TGAAGCCCGG
TACGTCGCCA AGCGGTTTTT CGCGGATGGC GAAGTGCCGC CGCGGATCAT TCAGGATCCT
CGGGAGACGC GCACCTGGCT TCCGCCAGAG GCACGCGCGG CTCAAAGGCC CGCCGACCGT
TCGACATCGG GCTGA
 
Protein sequence
MKRHGRRLAW VAVAAAAFGA WHAWPRPERP HAHAHGSHSV APSSASWTAT DPGTTRLGGR 
ETILVLGSDK RPEDPRGNAD VLLVASLDDS HRRIELLSIP RDTQVAFPDG RYHKINEALA
SGGPEETCML VERLIGLPID HYAIIRFDAL VHMVDRIGGL DIDVPRNMDY RTGDKVYGVI
RLRKGRHHLS GEQALQFVRY RHDALGDIGR TERQQAFLVA LKDQLLRPQT LPRLPEVAFD
AWKMIDTDMS LGDISRLAAR APQYKTYRTV HTTLPGSFHD PDPSIPGDLS YWVVNPAEAR
YVAKRFFADG EVPPRIIQDP RETRTWLPPE ARAAQRPADR STSG