Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1851 |
Symbol | |
ID | 8425368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 1900839 |
End bp | 1902053 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645027963 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_003185252 |
Protein GI | 258511818 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.990249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCGC TTGCAGGCGT CCGCGTGCTC GACCTCAGTC GAGTGCTCGC GGGGCCCTTT TGTACCCAGA TTCTCGGCGA TCTCGGCGCC GACGTGATCA AAGTCGAGAG CCCGCAGGGC GACGAGACCC GCAGGTATGA ACCCACCAAG AACGGCGTGA GCAGCTATTT TCTCGCGTTC AACCGGAACA AACGGAGCCT TGCGGTGGAT TTAAAGACCG AAGCAGGGCG CGAGATTGTG CGCAGGCTCG CGCAGGAAGC GGACGTGCTC GTGGAGAACT TTCGCACAGG AACGATGGAG CGGTGGGGAC TGGACCATCG CTCGCTCCGA GCGGCGAATC CCCGGCTCAT CTACGTGGCC ATCAGCGGGT ACGGTCGCAC GGGCCCTTGG AAGGATCGGC CGGGGTACGA TCTCGCCATT CAGGCCGCGA GCGGGTTGAT GTCGGTCACA GGGGAGGCGG GGCGCGGGCC TGTGCGCGCC GGCTGGTCCA TCGCCGATTT GACGGCCGGG CTCTGGGCTG CGCTCTCCAT CTGTGCCGCG CTGTTGGAGC GCCAACACAC GGGGCGCGGC ACCTACCTGG AGACGAGCCT GTTTGAAGGC CAGGTGGCGC TCATGACGTA TTACGCCACG GCGTACTTCC TCACGGGTCA CGTGGGCGAA CGGCTGGGCT CATCTCACTT CAGCCTCGCG CCGTATCAGG CGTTGTCCGC GGCCGACGGA TGGATGGTCG TCGCGGTCGG GAACGATGGG CTGTTTCGCA GGCTGTGCGA AGCCATAGGA AGCCCTGAGC TCGCGGACGA CCCTCGATTT CAAACGAACG GGCTCCGCGT GCGCCACCGG AGCGAGCTAG CGGCTCAACT CGAAGCGCGG CTGGCCGAGC GAAGTGTGCG CGAATGGGAG AAGGTTCTGA TGGAGGCGGG CGTGCCCTGT TCTGCGGTGA ACCGGATTGA CGAGGTCCTT CATCTGGAGC AGGTCGCGGC TCGAGGCATA CTGTGGGAGA CCCAGTACCC GGGGGTTGGA TCGTTCTTCG TGACGAGATC GCCCTTTTTC GGAGAAGGGT GGGACCTTCA CCTGCGTCGG CGCCCGCCGG GGCTCGGCGA ACACACGGAG GCGATTCTGT CGGAGGTGGG ATACCGTTCT CAGGAGATTG AAGCGTTGAA GGCGGCGGGC GTGGTTGTGA GTTGTCCACC GTCGGATTCG GAGACATCGG CGTAG
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Protein sequence | MQPLAGVRVL DLSRVLAGPF CTQILGDLGA DVIKVESPQG DETRRYEPTK NGVSSYFLAF NRNKRSLAVD LKTEAGREIV RRLAQEADVL VENFRTGTME RWGLDHRSLR AANPRLIYVA ISGYGRTGPW KDRPGYDLAI QAASGLMSVT GEAGRGPVRA GWSIADLTAG LWAALSICAA LLERQHTGRG TYLETSLFEG QVALMTYYAT AYFLTGHVGE RLGSSHFSLA PYQALSAADG WMVVAVGNDG LFRRLCEAIG SPELADDPRF QTNGLRVRHR SELAAQLEAR LAERSVREWE KVLMEAGVPC SAVNRIDEVL HLEQVAARGI LWETQYPGVG SFFVTRSPFF GEGWDLHLRR RPPGLGEHTE AILSEVGYRS QEIEALKAAG VVVSCPPSDS ETSA
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