Gene Aaci_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1804 
Symbol 
ID8425319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1855467 
End bp1855985 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content58% 
IMG OID645027914 
ProductShikimate kinase 
Protein accessionYP_003185205 
Protein GI258511771 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACCT TGCGTGTGGC GTTGGTAGGT TTTATGGGGT GTGGAAAATC GACCGTGGGT 
CCAGTCCTTG CGCGCCGCCT TGGATTTGAA TTCGTCGATC TCGACCTCGA CATTCAGAAG 
ACGGCCGGAA GAACGATCCC GGAGATTTTT GAGCAGGATG GCGAGTCGTC ATTTCGCGCA 
CTCGAATCGG AGTGTTTGGC GCGATGCGCT CGCCGGTCTC ACCTGGTGGT GGCCCCAGGA 
GGGGGCGTCG TGATCGTGCA AGCCAACCGT CGCCTTTTGC GCACTCATTT CCATGTCGTC 
TATCTCCGCG CGCGGCCGAC GACCCTCGCG GAGCGCCTTC GGGGGGAAGC CGAACACCGC 
CCTATGTTGC GAGGGCATCC GCTCGAAGAC AGGATCACGC GCTTGTTGGG CGAACGTGGA 
GCGTTTTACC ATGAAGTCGC GTCGCAGATT GTCGATGTCG ATGGAAAATC CCCTGAAGCT 
ATCGCTGAAG AAATTTCAAA TGGCCTGAAA TCGACCTAA
 
Protein sequence
MGTLRVALVG FMGCGKSTVG PVLARRLGFE FVDLDLDIQK TAGRTIPEIF EQDGESSFRA 
LESECLARCA RRSHLVVAPG GGVVIVQANR RLLRTHFHVV YLRARPTTLA ERLRGEAEHR 
PMLRGHPLED RITRLLGERG AFYHEVASQI VDVDGKSPEA IAEEISNGLK ST