| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1681 |
|---|
| Symbol | |
|---|
| ID | 8425191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1751301 |
|---|
| End bp | 1752365 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645027786 |
|---|
| Product | Peptidoglycan-binding lysin domain protein |
|---|
| Protein accession | YP_003185082 |
|---|
| Protein GI | 258511648 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1388] FOG: LysM repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.86934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGTC GTTGGCAGGC CATCCTAGCT GGCGCGCTCG CGTTTGTCGC TGCGCTGGGA
CTTTGGACAA GCGACCGAGC GAACCCGGCG CCGGCCGCCA CGGCGCCCGT AGCCGACGCG
CGCACCCCGT TCCAGCGAGC GTCGAGTCTA TCCCTTTTGC CTCGGGTCGA ATGGGCAGCG
AACCGGGCGC GTTCGGACGG ACCCTCTCAC ATGGACGCGA TCGACGTGAA ACTTGTGCAT
CGGCCGGAGA CCGCCCTGGC CGCTCAGGCG GAGATGCACC ACGCGGCCGC GAGCGCGATG
GCGGCCAAGC CCGTCCGAAC GACGCTCCTT TGCGTCCGCG CAGGGGAATG CCTGTGGACC
ATCGCCGAAT CCCATCACAC AACCGTGGCC GAACTGGTGC AGTATAACCA CCTTCGCTCC
ACGGTTCTTC ACGTTGGCCA GGTATTGCGC CTGCCCGCGG GCGCGCACCG GCCGTTCGCG
TTGCCGAAGT CGCCGGAAGC GAGTTCCTCG TCCCTCGTGC CGAGCCTGAC CTACACCGTT
CAACCGGGGG ACTCGCTTTG GGAGATCTCG AATATCTTTG GCGTCTCTGT CTCCGCCATC
TGCAGCGCGA ACCACCTGAC CCAAACGGCC ATCTACCCCG GCGAACGGCT CGTCATTGAG
CCTTCGAGCG CCTTCGGCGG ATCGCAGGCG CAAAGCGTGC TGTTGCGCGA AGCGCCGCCC
TGGCTCATCC CTGTCTACAA GGCCGCCGGC GCGAAGTACG ATATTCCCTG GACCGTGCTC
GCCGCCATCC ACAAAGTCGA GACGGATTTC AGCACGGACG GAGACATCGA ATCTTACGCC
GGCGCCATCG GACCGATGCA GTTTATGCCG TCGACGTTCG CCATCTTCGG GGTACCTGCT
CCAGGTCACA AGGTTGCGGA CATCCACAAC GTGGAGGACG CCATCTACTC GGCCGCCAAC
ATGCTGCATC AGGAGAGATT CAGCTCGGAT CCGTATTACG CCATCTGGAT GTACAACCAT
TCGGCGACCT ACGTCGAGGA CGTCTTGCAC CTGGCGGTCA CCTGA
|
|---|
| Protein sequence | MFRRWQAILA GALAFVAALG LWTSDRANPA PAATAPVADA RTPFQRASSL SLLPRVEWAA
NRARSDGPSH MDAIDVKLVH RPETALAAQA EMHHAAASAM AAKPVRTTLL CVRAGECLWT
IAESHHTTVA ELVQYNHLRS TVLHVGQVLR LPAGAHRPFA LPKSPEASSS SLVPSLTYTV
QPGDSLWEIS NIFGVSVSAI CSANHLTQTA IYPGERLVIE PSSAFGGSQA QSVLLREAPP
WLIPVYKAAG AKYDIPWTVL AAIHKVETDF STDGDIESYA GAIGPMQFMP STFAIFGVPA
PGHKVADIHN VEDAIYSAAN MLHQERFSSD PYYAIWMYNH SATYVEDVLH LAVT
|
|---|
| |