Gene Aaci_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1559 
Symbol 
ID8425069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1622526 
End bp1623698 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content66% 
IMG OID645027664 
Producthypothetical protein 
Protein accessionYP_003184960 
Protein GI258511526 
COG category 
COG ID 
TIGRFAM ID[TIGR02887] germination protein, Ger(x)C family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.102998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGAGGC GCGTGCTCCT GCGCAAGCGC CGGCGCGCGA TCTCGGCCAC TCTTCTCTGC 
GCCGCCCTTG CGACCGGGTG CGATTATAAC GACATTGATC ACCTCTACAT CGCGACCGGG 
ATCGGCGTGG ATCGAGAGGA ACACAGCGTG CGGCTGTCCA TGGACCTCAT CCAACCCGGA 
GGCGCCGGCA ACCCGGCGAC GGGCGAGAAC TCCAATTCGC AGGGCAATGC GCCGGATTGG 
ATTGTGTCGG CGGACGCGCC GACGTTCGAA GAGGCCATGA GCGGTCTCCA AGCGAAGCTT 
TCTCATTCGC TGTACCTTCA GCACAACGCG CTCGTGCTGT TTTCGGAAGA CGCCCTGCGC 
GACTTCTCGC CCATCGCAGA CGCACTCGAG CGAGATCGGC AGTTGCGCCG CAGCCAGCTC 
TGGGTCGTCA CGCCGACGTC CGCCGAGTCG GTGCTGCGCG AGTCGACGGG GCAGAGCGAG 
CCTATCTCGC TCGTCATCCG AGATCTGGTG GATGAGGCAT CGCGCCGGGA GGCGTGCCTC 
GCGAGCGATG AGCTCCACGT GGTGAAAGCG CTGCTTCGGC CGTCGGGTGT CGCACCGCTG 
GCGGCCATTG AGGAGGGACC TGACGGATCG CCCGAAGTCA AGGGACTGGC CTATCTGAGG 
CGAGATGGAA AGTTGGATAT CGTCGATCGC GCCCGGTTGC TGGACAACGC CTGGTGGTTG 
GGGCGCACCC TCGATGTGCG CGAGGCGGTT CCCTGGACCG AGGGCGGACA CCAGGGTGTC 
ATGGGAGTGC ATTGGCTGCG CACCTCGACG CGGCTCGTGG TGGACACGTC CGGTCGATCC 
CCGAAGGTGC GCGTGGTCTG GCGCGGGACG GGCGAGATCG AGCGTTGGCA GGCGAGTGAG 
AAGATGAGCG CGCACACGTT CGCCGCACTG GAGCATGCCA TTCGCGAGGA CGTAAAACAT 
CGCCTCGCAG AGGCCCTCGA CCACGCCCGT GCGGTCGATA TGGACGCCTT TGGCTTGACC 
AACGCGTGCG CGGAGAAGGG CATCCAACTC CGCGAGGGGG CGTGGAAGCG TCTCCAGGTC 
GAGTATGACA TCGAACCTCA CATCGTCCAT GGCCAGCTGG CCAGCACGAC CCCGTTTGCG 
CAGGAGGCGA AGGGAGGCGG GGGCTCGTCA TGA
 
Protein sequence
MTRRVLLRKR RRAISATLLC AALATGCDYN DIDHLYIATG IGVDREEHSV RLSMDLIQPG 
GAGNPATGEN SNSQGNAPDW IVSADAPTFE EAMSGLQAKL SHSLYLQHNA LVLFSEDALR 
DFSPIADALE RDRQLRRSQL WVVTPTSAES VLRESTGQSE PISLVIRDLV DEASRREACL 
ASDELHVVKA LLRPSGVAPL AAIEEGPDGS PEVKGLAYLR RDGKLDIVDR ARLLDNAWWL 
GRTLDVREAV PWTEGGHQGV MGVHWLRTST RLVVDTSGRS PKVRVVWRGT GEIERWQASE 
KMSAHTFAAL EHAIREDVKH RLAEALDHAR AVDMDAFGLT NACAEKGIQL REGAWKRLQV 
EYDIEPHIVH GQLASTTPFA QEAKGGGGSS