Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1534 |
Symbol | |
ID | 8425045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1590030 |
End bp | 1591679 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645027643 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003184939 |
Protein GI | 258511505 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTTG CTCAACTGGT CGAGGCATGT CGCCAAGGCT TGCCAGAGTC TTGGAACACG CTTGTCTCCA TGTTCCGCCC ACAGGCGCTA GGCTGGGTCA CGCAGTTTTG CCGGGATCGA GATTTGGCGG AAGACGTTGT GCAGGAGAGC TGGCTGACCG CAGCACGTCA CCTGTCCGAG TTACGGAATC CACAGGCGTT TCCGCGTTGG TTCTTTCAGA TTGTGAAAAC GCAGGCGTAT CGCACGTTGA TGCAAGCGTA CAGGGAGCAG GTCGAGGAGA TGAAGGAGGT GGCGTCGGAT GTAGACCAAG AACGGAGTAC CGTCCTGAAA CTGGATTTGG AACGAGCGCT GGACAGCCTG CCGCTGGAAT TGAAACAGGT ATTTATTCTG GCAGGCATAT ACCAATGGCC CATCCGGGAT GTGGCCTCGT TCCTGAGAAT TCCGGCGGGG ACCGTTAAAT CGCGTTTGTC CAGGGCAAGG CAGCAATTGC AAGCCGCTCT GAAGGAGGGT GGAGGTGATG CGGCCGGCCA GGAGTCTGCC TACGAGTCAC TGTACTATGT CCTGTCTGCT TGGGGCTCCG GGGAAAAGGT CGATCATCCA ACGGTTCGCC ACACGTTGGC CAGAGCCTGG GCCACGATGA AAAGCCTGAG GTTCACGCTC ACCCGGGAAT GGCTTTCAGG TGAGCAGATC GGGAGAAGAC AACAAGCGCG GTATGCATGG CGTGCGCCCA ATTGGCTGAG GATTGAAACA GAATCGCCGG ATGCCGGGCG CGTCGTCACG GTCATTCATG GACGCCGCAT GCGGGTGCGG ATGGCAAAGA CGAACACCAT CCAGGAAGCA CAGGTCCCGC ACGAGGCGGA TCCATCGTTC ATGTTGGGCC ATCTTTGGAA AGCGTTGCTG ACCCGAGATG ACTTGGTGGT CATGCCGCCT GAGCAGGGCG AACGGTTATG GCACCTGTGG GTGGAGCTCG ATCGCGACGT CACCGCCGAG GAGGATGAGG CGTGTGAGAG CGTCCACTTC TGGATTCATC CGGAAGACGG TCTGCCGAGG CGCATCGAGT ACTGGAATGG GCGCGGGTGT GTGTTCCGCG AGGTGATGGA GGACATCGAA TGGAACGTAG CGGTTGCCAG GCGCGAGTTT ACCGTACCCA CGGATGGGAA GAAGTTGCGC CTGTGGACGT TGGGCGACCT CCTCGGCGGC CTCCCGATTC GTGTTGATCC GAGCGACGCG ATACGGCAGT GTCCGTTTCC GTTGATGGGG CTCGACCGGT CCGTCGTGAA GGAACTCGGA TTGCGCGACC ACATTGAAAT CTCCAAGTAT TATCACGGAC GAGAGTGGGC GGTTCGATAC GGTGCACCCT CGCGTTCCAG GGCGGTGTTG CGGGGTGAAG CCTTCATCAT CTTGTGGCAG GCAGGAGCGG TAACGGACGA CGTGCATCGT CATTGGGGGA TCTCAGACGT CCAAGACGAG TGTCTGGAAC TCGGGACCCA GGCGAGAAGC GGTGAAGTGA TCACGCCTCG TTTTGTGATT TCGAGACTGT ATTGGGAAAT GAACGGGAGG CCCTATCAGC TCATGGCTGC TGGTATTTCT ATGGACCGTT TGGTGAGCCT CGTGCGTTCG GTGAGGCCAC TGCGCGACGA CGGGAAGTGA
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Protein sequence | MEVAQLVEAC RQGLPESWNT LVSMFRPQAL GWVTQFCRDR DLAEDVVQES WLTAARHLSE LRNPQAFPRW FFQIVKTQAY RTLMQAYREQ VEEMKEVASD VDQERSTVLK LDLERALDSL PLELKQVFIL AGIYQWPIRD VASFLRIPAG TVKSRLSRAR QQLQAALKEG GGDAAGQESA YESLYYVLSA WGSGEKVDHP TVRHTLARAW ATMKSLRFTL TREWLSGEQI GRRQQARYAW RAPNWLRIET ESPDAGRVVT VIHGRRMRVR MAKTNTIQEA QVPHEADPSF MLGHLWKALL TRDDLVVMPP EQGERLWHLW VELDRDVTAE EDEACESVHF WIHPEDGLPR RIEYWNGRGC VFREVMEDIE WNVAVARREF TVPTDGKKLR LWTLGDLLGG LPIRVDPSDA IRQCPFPLMG LDRSVVKELG LRDHIEISKY YHGREWAVRY GAPSRSRAVL RGEAFIILWQ AGAVTDDVHR HWGISDVQDE CLELGTQARS GEVITPRFVI SRLYWEMNGR PYQLMAAGIS MDRLVSLVRS VRPLRDDGK
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