Gene Aaci_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1443 
Symbol 
ID8424950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1495010 
End bp1495972 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content68% 
IMG OID645027557 
Productpolysaccharide deacetylase 
Protein accessionYP_003184857 
Protein GI258511423 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID[TIGR02873] probable sporulation protein, polysaccharide deacetylase family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCAA GGCAGTTGGC TCTTGGTCTA TGCGCCGGTG CGTGTGCCTG GATGTTCGGC 
GCCGGGCTCT GGATACGCGC GGACGCCCCG CCTCAACCCA CGCCCGCCCC GTCGGAGCGC
GTGTGGGAGG AGGTGAGCCG CGCGTGGGCG AATCCTCCCA TCGATGCGCG GCGGGATCGC
GTGTGGCACA ACATCCCGGG CCTCTCCGGC TTTGCCCTCG ATACGGCGGC GAGCGAGCGC
GAGACGGCGC GATTCCACGA CGGCGCGCTG CACCTCGTGT GGCGAACGGT GCCGCCGAGG
GTACGGCTTC GCGATCTCCC GCCCGACGTG ATCTATCGCG GCCCGGCGGA GGAAAAATCC
GTCGCCCTCA TGGTGAACGT GTCCTGGGGC GAGGCGTACG TGCCGAGGAT GCTTCAAATC
TTGCGGGACG CGCATGTGAA GGCGACGTTC TTTGTCGACG GCGCCTGGGC GAAGAAGTTT
CCCGATCTCG TCCGCGCCAT GGCGCAAGAC GGGCACGCCG TGGAATCCCA CGGATCCGGG
CATCCGGACT TTCGCCGGCT GAACGACGCG AAGCTCGCCG CGCAGATCGA CGAGACCAAT
CGAGTTCTCG CGGCCATCAC GGGCAGAGCG CCGCGGCTCA TCGCGCCGCC CGCCGGATCG
TACGATGCTC GCCTCGCGCC GCTCGCAAAG TCGCGCGGCA TGTACGCCAT CCTGTGGACT
GCGGACACGG TCGACTGGAA AAACCCGCCC CCCGCCGCCA TTGTCGAGCG GGTGCAGCGG
GGCGCCGAGC CAGGTGCGCT CGTGCTCATG CACCCGACGG CTTCGACCGT CGAGGCGCTC
CCGGTGATGA TCCGCTGGCT TGAGGCGCGC GGGTACCGGA TGAAGACGGT GGAAGACGTG
ATCGACGAGC GGCCGGCAGT CACACCTCCC ACCATCCTGG CGCGGGAGAC CATCCGCTTA
TGA
 
Protein sequence
MKPRQLALGL CAGACAWMFG AGLWIRADAP PQPTPAPSER VWEEVSRAWA NPPIDARRDR 
VWHNIPGLSG FALDTAASER ETARFHDGAL HLVWRTVPPR VRLRDLPPDV IYRGPAEEKS
VALMVNVSWG EAYVPRMLQI LRDAHVKATF FVDGAWAKKF PDLVRAMAQD GHAVESHGSG
HPDFRRLNDA KLAAQIDETN RVLAAITGRA PRLIAPPAGS YDARLAPLAK SRGMYAILWT
ADTVDWKNPP PAAIVERVQR GAEPGALVLM HPTASTVEAL PVMIRWLEAR GYRMKTVEDV
IDERPAVTPP TILARETIRL