Gene Aaci_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1350 
Symbol 
ID8424854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1404321 
End bp1404737 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content61% 
IMG OID645027463 
Productputative helix-turn-helix protein YlxM/p13 family protein 
Protein accessionYP_003184766 
Protein GI258511332 
COG category[S] Function unknown 
COG ID[COG2739] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000485447 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAGTGG CTGAAAACCC GGATAGTATG AGAGACGTCA CGCGCGTGGG CGATCTGTAC 
GCCTTTTACG AGCCGCTTCT CACGGAGCGT CAGCGGCAGA TTGTGGAACT GTACCACTTT
GAGGATATGT CTCTCGGCGA GATCGCCGAG ATCTTGTCCA TCAGCCGGCA GGCGGTTCAC
GATCAGCTTC GCCGTGTCGA AGATCAACTC GAGTCGTACG AAGCAGCGCT TCACCTCCGG
GAACTCGCGC GGGCGGAGCG GAAGGCGTGG GAGCAGATGG TGTCCGCGTG GCGCGAGGCG
GCCGCGTACG TGCCCGAAGA GGTGAGGCGG CGCATGGACG ACGCCATGCG CGCCATGGGG
GCCACGGTTT CGATTCTGTT GGGAGGTGAT GCGGATGTTC GAAAGCCTGT CGAATAA
 
Protein sequence
MTVAENPDSM RDVTRVGDLY AFYEPLLTER QRQIVELYHF EDMSLGEIAE ILSISRQAVH 
DQLRRVEDQL ESYEAALHLR ELARAERKAW EQMVSAWREA AAYVPEEVRR RMDDAMRAMG
ATVSILLGGD ADVRKPVE