| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1347 |
|---|
| Symbol | |
|---|
| ID | 8424851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1399077 |
|---|
| End bp | 1399802 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645027460 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_003184763 |
|---|
| Protein GI | 258511329 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.461222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAGAGCA AGTGGCTTGA ACTCCAGGGG TTGCTGAATC TTCAGTTCAA CGATGTGAAC
CTTCTCAAAC AGGCTTTCAC GCACGCCTCG TACCGCAACG AGCATCGCAA ACTGCACGTC
GAGGACAATG AGCGCCTCGA ATTTTTAGGC GACGCCGTTC TCGAGCTCGT GGTGAGCGAC
TTTTTATACC GCACGTACCC CAAGATGCCC GAGGGCGAGC TGACGCGCAT GCGCGCCGCC
ATCGTCTGCG AGGCGTCGCT GGTCCGCTTC GCGAAACGGC TGTCGTTCGA CCAGTACATC
CGCCTCGGCC GGGGCGAGGA GCGCAGCGGC GGGCGTTCTC GCCCGGCTCT CCTGGCCGAC
GTGTTCGAGG CGTTCCTTGG GGCTCTGTAC CTGGACCAGG GCCTGGAGGC CGTGCGGCAG
TTCGTCCACA CCCACATGGT GCCGTATCTC CCCGACGTGT CCGCTGGCCT CGACTACAAG
ACGGCGCTGC AGGAACTCGT GCAACAGCGC CACCAGACGC CTGTGCGGTA CGTCATCGTG
GAAGAGCGCG GGCCCGCGCA TGCGCGCGAG TTCGTGGTGC AGGTGGAGCT GGGCGGCGAA
GTTCGCGGCG TCGGGATCGG CCGTTCCAAG AAGGAGGCGG AGCAGCAGGC TGCGGCGATG
GCCCTGGCCT CGCTGTCCGA AGAACGCTCG GAGGAGCGTG TCACCGGTGT ATCTCAAACA
GATTGA
|
|---|
| Protein sequence | MQSKWLELQG LLNLQFNDVN LLKQAFTHAS YRNEHRKLHV EDNERLEFLG DAVLELVVSD
FLYRTYPKMP EGELTRMRAA IVCEASLVRF AKRLSFDQYI RLGRGEERSG GRSRPALLAD
VFEAFLGALY LDQGLEAVRQ FVHTHMVPYL PDVSAGLDYK TALQELVQQR HQTPVRYVIV
EERGPAHARE FVVQVELGGE VRGVGIGRSK KEAEQQAAAM ALASLSEERS EERVTGVSQT
D
|
|---|
| |