Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1319 |
Symbol | |
ID | 8424823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1372532 |
End bp | 1374949 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645027433 |
Product | primosomal protein N' |
Protein accession | YP_003184736 |
Protein GI | 258511302 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.342383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAG GGACCGCGCG CGTCGCGGAG GTCGTGGTCG ACGGGACGGC GCTGTTTTTG GACAAGCGGT TCGATTACAT CGTTCCGCCG GGGATGGATG TATCGCCCGG CGTGCGCGTG GTGGTGCCGA TGCGAGACTC GGTGCGATCC GGCATCGTCT GGGCGGTGCG GGAGGTCGCC AACGTCGGCG GGCTTCGTCC GCTCGCGCGC GTGATCGACC GAGTTCCCGT GCTGACGCCT CATCAGATGC GCATGGCGGA GTGGCTCTGC GACCGATATG CCGCCACGCT TCCGGAGGCC GTGTCGGCCA TCCTGCCGGG GGCGTTTCGC GTGCGCGTGC GCAAAGTGAT CGTGCCGAGC GCGGATGCGC CCGTCCCGGA CGACGTGAAA GCCTCGACAC TCTTTCGCTT CATCGCCGAG TCCGAGCCCG AGTGGAGCGA GATTCGGGCG CGATCGAAGG CGGACGAGCG CGCCGCCAGG GCGTGGGCCG AAGCCGGATT CGTTCGCGAA GAGCTCCGGG TGGATGAGGC GGTGGGCGAG AAGCGGCGGG CCTACCTCGT CACCCGCGCG TCGGAGGTGG ATCTCAGGCG CGAGGCGGAA CGGCGGAGTC GGCGCGCGCG GCGCCAGAGC GAGCTGCTGC TGCACCTCGC CGAAGCGGGC GAGATGCCGT GGGACAGGCG GGCGTATCCG CTCTCTTCCG TGGCGCCGCT CATCGAGGCG GGACTGGTGG CTGTCGCGGA GCGGCGCGTG AAGCGGGCCC CTGCCTCGCT CGACGCGGAG GAGCCCTGGC CAGAGCTCAC GCCGTATCAG GTGGCGGCGG TGCGAGCGCT GGCCGAGATG GCCCGACAGG GGCATGGCGT GGCCCTGCTG CACGGCGTGA CGGGCAGCGG CAAGACCGAG GTGTACATGC ACCTGATTCG CGGGGCCATC GAAGACGAGG GTCAGGCACT CGTTCTGGTG CCCGAGATCG CGCTCACGCC GCAGCTCGTG CAGAGGTTCG AGCGAAGGTT CGGAGGCCGG GTTGCCGTCC TGCACTCGGG ATTGTCGCTC GGCGAGCGGC GTGAGGAGTG GACGCGGGTC CTCGAAGGAG AGGCGAGCGT GGTGATTGGG GCGAGATCGG CGGTCTTCGC GCCGATGCGC AAGCTTCGAC TGGTCGTCAT CGACGAAGAA CACGAGCCTT CCTACAAGCA GGAGGACGCG CCGCACTACG ACGCGCGCGA AGTGGCGATG TGGCGCGCAA GGGAGGCGGG TGCGCTCGTG GTTCTCGGCT CTGCGACGCC CTCGCTCGCG TCGATGTTTC GGGTGGAGCG AGGCGACGCG AGGCTCGTCT CCCTGCCGGT TCGGGCGAAC CGGCGGCCTC TTCCGCCGGT GGACGTGATC GATATGCGCG AGGAGCTGCG CGCGGGAAAC CGGTCGATTT TCAGCCGCAG GCTCGCGGCG GAGCTGGAGC GCACGGTGTC GGAGGGGATG CAGGCTATCC TGTTTCTTAA TCGACGCGGC TACGCGCACG CGGCGCTGTG CCGGGCTTGC GGGCACAGCA TGGAGTGTCC CCGCTGTGAC ATTCACCTCA CGGTCCACCG GCGGGCGGAC GGGCACGTCC TTGTGTGCCA CTACTGTGGG CACGAGGAGC CGCTCGTGCG GCGCTGTCCT GCTTGCGCCG AGGATGCGCT GGTCCCGTAT GGACTCGGAA CCGAGCAGGT GGAGCAGCAC CTGCTGCGCA CGTGGCCCGC GATGCGAGTC CTCCGTATGG ACTTGGACAC CACGCGGCGG AAGGGGGCGC TCGAGTCTAT CATCGATCGG TTCCAGCGGG GCGAAGCGGA CGTGCTCGTG GGCACGCAGA TGATCGCGAA GGGGCTCGAC TTTCCGCGGG TGCGGCTGGT GGGCGTCGTG GCGGCGGATG CGATGCTCAC GCTTCCGGAC TACCGAGCGA ACGAGCGCGC GTTTCAGCTT CTCACGCAGG TGGCCGGGCG GGCCGGGCGA GCCGAAACCG ACGGTATCAC GCTTATTCAG ACGTATCAGC CCGGGCACCG CGCCATCGAA GCGGCGAAAT CGCACGATTA TCGGCAGTTC TACGAGCGAG AGCGGGAAAG CCGCGAATTC TTTCGCTATC CGCCCTTCTG CGAACTGGCG GTCTTTCTCG CCTCGCATTC GGAGGAGCGG CTGGCGCGCG GCGCCGCGGC GAGGTTCGAG CGAGAACTCG CGCGTTCGCC GTCCGCCGCG TCCTTGACCG TGTTGCCTGC CGGGCCAAGC GGCATTCGGC GGATCGACAA CGTGTATCGC TATCAGGTTG TGATGAAGTA CGCGGCGTGG CAGGATGTGA AAGAGGACGT CGTGCGCGCG TACCGATTGG TGAAGGAGAA GATGAACCGG CTGGGTGGAT CCGCCGTCCT CGACGTCAAC GCCCAGCGGA TCGGTTGA
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Protein sequence | MTAGTARVAE VVVDGTALFL DKRFDYIVPP GMDVSPGVRV VVPMRDSVRS GIVWAVREVA NVGGLRPLAR VIDRVPVLTP HQMRMAEWLC DRYAATLPEA VSAILPGAFR VRVRKVIVPS ADAPVPDDVK ASTLFRFIAE SEPEWSEIRA RSKADERAAR AWAEAGFVRE ELRVDEAVGE KRRAYLVTRA SEVDLRREAE RRSRRARRQS ELLLHLAEAG EMPWDRRAYP LSSVAPLIEA GLVAVAERRV KRAPASLDAE EPWPELTPYQ VAAVRALAEM ARQGHGVALL HGVTGSGKTE VYMHLIRGAI EDEGQALVLV PEIALTPQLV QRFERRFGGR VAVLHSGLSL GERREEWTRV LEGEASVVIG ARSAVFAPMR KLRLVVIDEE HEPSYKQEDA PHYDAREVAM WRAREAGALV VLGSATPSLA SMFRVERGDA RLVSLPVRAN RRPLPPVDVI DMREELRAGN RSIFSRRLAA ELERTVSEGM QAILFLNRRG YAHAALCRAC GHSMECPRCD IHLTVHRRAD GHVLVCHYCG HEEPLVRRCP ACAEDALVPY GLGTEQVEQH LLRTWPAMRV LRMDLDTTRR KGALESIIDR FQRGEADVLV GTQMIAKGLD FPRVRLVGVV AADAMLTLPD YRANERAFQL LTQVAGRAGR AETDGITLIQ TYQPGHRAIE AAKSHDYRQF YERERESREF FRYPPFCELA VFLASHSEER LARGAAARFE RELARSPSAA SLTVLPAGPS GIRRIDNVYR YQVVMKYAAW QDVKEDVVRA YRLVKEKMNR LGGSAVLDVN AQRIG
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