Gene Aaci_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1314 
Symbol 
ID8424818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1365303 
End bp1367087 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content66% 
IMG OID645027428 
ProductFibronectin-binding A domain protein 
Protein accessionYP_003184731 
Protein GI258511297 
COG category[K] Transcription 
COG ID[COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGGTT GGACCTTGCG CCGCCTCGCG CGCGAACTCG ACGACGCGTT GCGAGGCGCA 
CGGATCGACA GAATTTATCA ACCCGGCGAG CGCGATCTCG TCCTCGCCGT CCGCTCGGCC
CATTTGGGAG CGCGGCGCCT GTACATGTCC GCCCACCAAC AATTTGCGCG CGTCCACTTT
CTGGCGGACG AGCGCCCAGA CAACCCGGCC ACGCCGCCGA TGTTCTGCGT CCTCTTGCGC
AAACACATTG AGGGGGGGCG CATCCTCCGC GTCACGCAGC CGGGATGGGA TCGGGTGCTT
GAAATGGAAA TTGAAGCGCT GGACGATCTC GGCGACCGGC GCGCGTACGC TCTGATCTGC
GAGATCATGG GGCGACACAG CAACATCGTG CTCGTCGAAG AGCGGACCGA CGGAAGCCGC
CTGATCATCG ACAGCGCCGT GCGCGTCTCG GAGGAGATGT CCCGTTACCG AGCCGTGCTG
CCGGGAATCC CCTATCTTCC GCCGCCCCCT CAACGCAAGA AGCCCGTGGA ACAGTGCGCG
CCGGAGGATT TCCTCGGCGT CGAGCCATCC GCCGGCGCCT CCCGCGCCAA TCAGATGGCC
ATCGTGGAGA AGCTCGCCGG TACGGGACCT GTGACGGCTC GCGAGATCCT CCATCGCGCC
ATCGCGCGAA CGGGTTCCGC TGAGCCGACG TCCATTCATC GGGCGGCCCT CGATCTCGCA
GCCGCCGTGG ATGAAGGGCG GGAGCCCGCT TCCGTCGGCC TCGACGACGT GGGCCGGGCC
GTGGAATGCG CCCCGTTTCG GCTCACGTCG CGCGCTCGAT TCGCGGAATG CGAAACGGTG
AGCGACGCCA TCCGCTGGCT GTTCGCCGAT ACCGGCGAGT CTCTGCGCCA GTCGCGCTTG
GCCCGCGAGC TGGAGCGGAC CGTGAGAGAA CACATGGACC GCCTGCGGGG CAAGCTCGTC
CGCCTCGAGC AGGAGTGGGA AGACGCCGAG GCGGAGGAGG AACTGCGGAT CAAGGCCGAG
CTTCTGACCG CGTACGCGCA CGAGGTTCCG CGTGGGGCGT CGGAGGTCGA GCTGCCGAAC
TACTACGACG ACAACCGACC CTTGCGGATC GAACTCGACC CCGCGCTCGA CGCCATCGCC
AACGCTCAGC GCCTCTTTCG CATGGCGGCG AAACGAAAGC GGGCGCGGCA GTGGATCGAA
GCGGAGCGCG AAAACACGCT GCGAGACCTG CGCTACCTGG AAGATGTGTT GCAGGCACTC
GCGGATACCT CCCTCGAAAA CCTCGAAGAG GTGCGCCGAG AACTCCAAGC GCAGGGGTTC
TTGGCGCGGG CCGATCGACG AGGGACAGGC GGCAAGCGGC GCGCCGCAGA GTCGGAGCCG
CACGCGTTTC GGTCCAGCGA TGGATTCGTC ATCCGCGTTG GCCGGAACAA CGTGCAGAAC
GACCGGCTGA CGTTCCGCAG GGCCGACAAG CGCGACCTAT GGCTCCACGT GAAGGATGCG
CCGGGGTCGC ACGTCGTGAT CGAACGGGGC CAGGCGGACG AGATCCCGGA ACGCACCATC
GAGGAGGCCG CCGCGCTCGC CGCGTACTTC AGCCGAATGC GCGATTCGGC GAACGTGCCC
GTCGACGTGA CGGAAATCCG CCACGTGTGG AAGCCGAATG GAGCCCGCCC CGGTTTTGCG
CTGTATGACC ATCAGAGAAC GCTGTTCGTG ACGCCGGAGC GATCGCTTGT GGAGAGCATC
ATGTCCCGAA CGCTTGCGAG GCGCGAAACG AGCGATTCCC GTTAA
 
Protein sequence
MDGWTLRRLA RELDDALRGA RIDRIYQPGE RDLVLAVRSA HLGARRLYMS AHQQFARVHF 
LADERPDNPA TPPMFCVLLR KHIEGGRILR VTQPGWDRVL EMEIEALDDL GDRRAYALIC
EIMGRHSNIV LVEERTDGSR LIIDSAVRVS EEMSRYRAVL PGIPYLPPPP QRKKPVEQCA
PEDFLGVEPS AGASRANQMA IVEKLAGTGP VTAREILHRA IARTGSAEPT SIHRAALDLA
AAVDEGREPA SVGLDDVGRA VECAPFRLTS RARFAECETV SDAIRWLFAD TGESLRQSRL
ARELERTVRE HMDRLRGKLV RLEQEWEDAE AEEELRIKAE LLTAYAHEVP RGASEVELPN
YYDDNRPLRI ELDPALDAIA NAQRLFRMAA KRKRARQWIE AERENTLRDL RYLEDVLQAL
ADTSLENLEE VRRELQAQGF LARADRRGTG GKRRAAESEP HAFRSSDGFV IRVGRNNVQN
DRLTFRRADK RDLWLHVKDA PGSHVVIERG QADEIPERTI EEAAALAAYF SRMRDSANVP
VDVTEIRHVW KPNGARPGFA LYDHQRTLFV TPERSLVESI MSRTLARRET SDSR