Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1314 |
Symbol | |
ID | 8424818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 1365303 |
End bp | 1367087 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645027428 |
Product | Fibronectin-binding A domain protein |
Protein accession | YP_003184731 |
Protein GI | 258511297 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGGTT GGACCTTGCG CCGCCTCGCG CGCGAACTCG ACGACGCGTT GCGAGGCGCA CGGATCGACA GAATTTATCA ACCCGGCGAG CGCGATCTCG TCCTCGCCGT CCGCTCGGCC CATTTGGGAG CGCGGCGCCT GTACATGTCC GCCCACCAAC AATTTGCGCG CGTCCACTTT CTGGCGGACG AGCGCCCAGA CAACCCGGCC ACGCCGCCGA TGTTCTGCGT CCTCTTGCGC AAACACATTG AGGGGGGGCG CATCCTCCGC GTCACGCAGC CGGGATGGGA TCGGGTGCTT GAAATGGAAA TTGAAGCGCT GGACGATCTC GGCGACCGGC GCGCGTACGC TCTGATCTGC GAGATCATGG GGCGACACAG CAACATCGTG CTCGTCGAAG AGCGGACCGA CGGAAGCCGC CTGATCATCG ACAGCGCCGT GCGCGTCTCG GAGGAGATGT CCCGTTACCG AGCCGTGCTG CCGGGAATCC CCTATCTTCC GCCGCCCCCT CAACGCAAGA AGCCCGTGGA ACAGTGCGCG CCGGAGGATT TCCTCGGCGT CGAGCCATCC GCCGGCGCCT CCCGCGCCAA TCAGATGGCC ATCGTGGAGA AGCTCGCCGG TACGGGACCT GTGACGGCTC GCGAGATCCT CCATCGCGCC ATCGCGCGAA CGGGTTCCGC TGAGCCGACG TCCATTCATC GGGCGGCCCT CGATCTCGCA GCCGCCGTGG ATGAAGGGCG GGAGCCCGCT TCCGTCGGCC TCGACGACGT GGGCCGGGCC GTGGAATGCG CCCCGTTTCG GCTCACGTCG CGCGCTCGAT TCGCGGAATG CGAAACGGTG AGCGACGCCA TCCGCTGGCT GTTCGCCGAT ACCGGCGAGT CTCTGCGCCA GTCGCGCTTG GCCCGCGAGC TGGAGCGGAC CGTGAGAGAA CACATGGACC GCCTGCGGGG CAAGCTCGTC CGCCTCGAGC AGGAGTGGGA AGACGCCGAG GCGGAGGAGG AACTGCGGAT CAAGGCCGAG CTTCTGACCG CGTACGCGCA CGAGGTTCCG CGTGGGGCGT CGGAGGTCGA GCTGCCGAAC TACTACGACG ACAACCGACC CTTGCGGATC GAACTCGACC CCGCGCTCGA CGCCATCGCC AACGCTCAGC GCCTCTTTCG CATGGCGGCG AAACGAAAGC GGGCGCGGCA GTGGATCGAA GCGGAGCGCG AAAACACGCT GCGAGACCTG CGCTACCTGG AAGATGTGTT GCAGGCACTC GCGGATACCT CCCTCGAAAA CCTCGAAGAG GTGCGCCGAG AACTCCAAGC GCAGGGGTTC TTGGCGCGGG CCGATCGACG AGGGACAGGC GGCAAGCGGC GCGCCGCAGA GTCGGAGCCG CACGCGTTTC GGTCCAGCGA TGGATTCGTC ATCCGCGTTG GCCGGAACAA CGTGCAGAAC GACCGGCTGA CGTTCCGCAG GGCCGACAAG CGCGACCTAT GGCTCCACGT GAAGGATGCG CCGGGGTCGC ACGTCGTGAT CGAACGGGGC CAGGCGGACG AGATCCCGGA ACGCACCATC GAGGAGGCCG CCGCGCTCGC CGCGTACTTC AGCCGAATGC GCGATTCGGC GAACGTGCCC GTCGACGTGA CGGAAATCCG CCACGTGTGG AAGCCGAATG GAGCCCGCCC CGGTTTTGCG CTGTATGACC ATCAGAGAAC GCTGTTCGTG ACGCCGGAGC GATCGCTTGT GGAGAGCATC ATGTCCCGAA CGCTTGCGAG GCGCGAAACG AGCGATTCCC GTTAA
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Protein sequence | MDGWTLRRLA RELDDALRGA RIDRIYQPGE RDLVLAVRSA HLGARRLYMS AHQQFARVHF LADERPDNPA TPPMFCVLLR KHIEGGRILR VTQPGWDRVL EMEIEALDDL GDRRAYALIC EIMGRHSNIV LVEERTDGSR LIIDSAVRVS EEMSRYRAVL PGIPYLPPPP QRKKPVEQCA PEDFLGVEPS AGASRANQMA IVEKLAGTGP VTAREILHRA IARTGSAEPT SIHRAALDLA AAVDEGREPA SVGLDDVGRA VECAPFRLTS RARFAECETV SDAIRWLFAD TGESLRQSRL ARELERTVRE HMDRLRGKLV RLEQEWEDAE AEEELRIKAE LLTAYAHEVP RGASEVELPN YYDDNRPLRI ELDPALDAIA NAQRLFRMAA KRKRARQWIE AERENTLRDL RYLEDVLQAL ADTSLENLEE VRRELQAQGF LARADRRGTG GKRRAAESEP HAFRSSDGFV IRVGRNNVQN DRLTFRRADK RDLWLHVKDA PGSHVVIERG QADEIPERTI EEAAALAAYF SRMRDSANVP VDVTEIRHVW KPNGARPGFA LYDHQRTLFV TPERSLVESI MSRTLARRET SDSR
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