| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0988 |
|---|
| Symbol | |
|---|
| ID | 8424480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1060697 |
|---|
| End bp | 1061929 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645027099 |
|---|
| Product | cysteine desulfurase, SufS subfamily |
|---|
| Protein accession | YP_003184415 |
|---|
| Protein GI | 258510981 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.699231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGG AAGAGCTTCG CAAGGATTTT CCGATTTTGT CTGAGCGAAT CAACGGGCAT
CGGCTGGTGT ACCTGGATAA CGCGGCGACG TCGCAGAAGC CGCGCCAGGT CATCGACGCC
ATTCGGCGAT ACTACGAGCA CGACAACTCC AATGTGCACC GCGGGGTGCA TACGCTGGGT
TCGCGCGCGA CCGAGGCTTA CGAGGCGGCG CGGGAACGGG TGGCGCGGTT CATCCGGGCG
AAATCGCCGC AGGAGATCGT GTTCACGCGG GGCACGACGG AGTCGCTGAA TATGATCGCG
CACGGGTACG CCCGCGCGAA GCTGCGCGAA GGCGACGAAA TTGTCCTGCC GCCGAGCGAG
CACCACTCGA ACCTCATCCC GTGGCAGCAG GCGGCGCGTG CGACGGGCGC CACGCTGCGG
TACCTGCCGC TCCAGCCGGA CGGGACCATT CGGCTGGAGG ACGTCGAGGC GGCGGTGACG
GATCGGACGA AGATCGTGGC CATCGCCCAC GTGTCGAACG TGCTCGGCAC GGTGAACCCG
GTGCGGGAAA TCGCCGAGAT CGCCCACCGC CACGGGGCCA TCATCGTGGT GGATGGGGCG
CAGAGCGTGC CGCACATGCC GACGGACGTC GTGGAGATGG ACTGCGACTT TCTGGCGTTC
TCGGGCCACA AGATGCTCGG GCCGACGGGA ATCGGCGTGC TGTACGGCAA AGCCGAGCTG
TTGGCGGAGA TGGAGCCGAC GTACTTCGGC GGCGAGATGA TCGACGTGGT GGATCTGTAC
GAGTCGACGT GGAAAGAGGC GCCGTGGAAG TTTGAGGGCG GCACGCCCAT CATCGCGGGC
GCCATCGGTC TGGCCGCCGC GATGGACTAT CTCGAGAAGG TGGGCTTGGC GGAGATCGAG
CGACACGATG CGGCGCTCGC GGCGAAGGCG GTCGAGCGGC TGGCCGAGAT CGACGGCGTG
ACCATCTTCG GGCCGCCGCC TGGGCAGTCG CGCGCGGGCC TCGTCACGTT CAACCTGGGC
CGCGTCCATC CGCACGATCT CGCCACTGTG CTCGACGCGC GCGGCGTGGC CATTCGGGCA
GGGCACCATT GCGCCCAGCC GCTGATGCGC CTGTTCAACG TCCCGGCGAC GGCGCGCGCG
AGCTTCTACC TGTACAACAC CGAGGAAGAC GTCGATGCAC TCGTGGATGC CGTCCTCGAG
GCAAAGGAGT TTTTCGGCCA TGCAATTGGA TGA
|
|---|
| Protein sequence | MNAEELRKDF PILSERINGH RLVYLDNAAT SQKPRQVIDA IRRYYEHDNS NVHRGVHTLG
SRATEAYEAA RERVARFIRA KSPQEIVFTR GTTESLNMIA HGYARAKLRE GDEIVLPPSE
HHSNLIPWQQ AARATGATLR YLPLQPDGTI RLEDVEAAVT DRTKIVAIAH VSNVLGTVNP
VREIAEIAHR HGAIIVVDGA QSVPHMPTDV VEMDCDFLAF SGHKMLGPTG IGVLYGKAEL
LAEMEPTYFG GEMIDVVDLY ESTWKEAPWK FEGGTPIIAG AIGLAAAMDY LEKVGLAEIE
RHDAALAAKA VERLAEIDGV TIFGPPPGQS RAGLVTFNLG RVHPHDLATV LDARGVAIRA
GHHCAQPLMR LFNVPATARA SFYLYNTEED VDALVDAVLE AKEFFGHAIG
|
|---|
| |