Gene Aaci_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0948 
Symbol 
ID8424441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1024839 
End bp1025936 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content66% 
IMG OID645027061 
ProducttRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase 
Protein accessionYP_003184377 
Protein GI258510943 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGC GTGTGGTGGT GGGCATGTCC GGCGGCGTGG ATTCGTCCGT GACGGCGCTT 
CTCCTCAAGC AAGCGGGCTA CGACGTGATC GGCGTGTTCA TGAAGAACTG GGACGAGACG 
GACGAGAACG GCGCCTGCAC CGCGGAACAG GATTTCGAGG ACGTGCGCCG GGTGTGCGAG 
CAGATTGGGA TCCCGTATTA CGGCGTCAAC TTCGAGCGCG AGTACGAGGA GCGCGTATTC 
CAGCACTTCC TGGAGGAGTT CAAGCGCGGG CGCACGCCGA ACCCGGACGT GCTCTGCAAC 
CGAGAGATCA AGTTCAAGGA ACTGCTCGCC TGCGCCCTCG ACCTCGGCGC CGACTACCTC 
GCCACGGGGC ACTACGCCCA GGTGCGCAAG GACGAGGATG GCACGGTGGC ACTTTTGCGG 
GGGCGAGATA AGAACAAGGA TCAGACCTAC TTTCTGCACA TGCTCACGCA GGCCCCGCTC 
CGGCGGGCCA TGTTTCCCAT CGGCCATCTG ACCAAGCCGG AGGTGCGCCA GATTGCGCGC 
GATCACGGCC TGCACGTGGC GCAGAAGAAG GACTCGACGG GCATCTGTTT CATCGGAGAG 
CGCAACTTTC GCGCCTTCCT GCAGCAGTAC CTGCCCGCGC AGCCGGGCCT CATCGAGGAC 
GTGGACGGGC GCGTGCTCGG CGAGCACGAC GGGCTCATGT ACTACACCAT CGGCCAGCGG 
AAGGGCCTGC GCCTGGGCGG CCTCCCTGGT CGCGATCCGG CCCCGTGGTT CGTGGTGGAC 
AAGGACCTCG CGCGAAACGT CCTCGTGGTG GCGCAGGGTC ACGATCACCC GCGCCTGTAC 
AGCCGGGCAC TCACAGCGGA CACGGTGAGC TTCGTCGCGG AACGGCCACC CGCAAAGCGA 
TTCCGCTGCA CGGCGAAGTT CCGCTACCGC CAGGACGAAC AGCCGGTCGA GGTCGAGATG 
ACGGGCGAAG ACACGTGCCG CGTCATCTTC GATGAGCCCC AGCGGGCCAT CACGCCGGGC 
CAGTCGGTGG TGTTCTACGA CGGCGAGGTG TGCCTCGGTG GGGGCATCAT CGCGTCGCGC 
GAGCCGGTGG ACGAGTGA
 
Protein sequence
MATRVVVGMS GGVDSSVTAL LLKQAGYDVI GVFMKNWDET DENGACTAEQ DFEDVRRVCE 
QIGIPYYGVN FEREYEERVF QHFLEEFKRG RTPNPDVLCN REIKFKELLA CALDLGADYL 
ATGHYAQVRK DEDGTVALLR GRDKNKDQTY FLHMLTQAPL RRAMFPIGHL TKPEVRQIAR 
DHGLHVAQKK DSTGICFIGE RNFRAFLQQY LPAQPGLIED VDGRVLGEHD GLMYYTIGQR 
KGLRLGGLPG RDPAPWFVVD KDLARNVLVV AQGHDHPRLY SRALTADTVS FVAERPPAKR 
FRCTAKFRYR QDEQPVEVEM TGEDTCRVIF DEPQRAITPG QSVVFYDGEV CLGGGIIASR 
EPVDE