| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0833 |
|---|
| Symbol | |
|---|
| ID | 8424326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 903565 |
|---|
| End bp | 905403 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645026948 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003184264 |
|---|
| Protein GI | 258510830 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0369945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCAAG TGCTGTGGAA ACTTCGCCAT TTCTTCTGGG AGGAACGAAA GCGATACGGG
ATCGCCGTCG GGCTCTTGCT GTTCCTCAAT GTCATCGACG TGATTCCGCC CTACCTCGTC
GGCCGATCCA TCGACCTCAT GAGCCAGCAC GGCATGACGC TCAGGGCGCT CGCCGAGCTC
GTGGGCGCCT TGCTCCTGAC CATTGTCGTG TCGTACGTGT GCGGCGTGAC GTGGCAATAT
CAGCTCTATT CCGGCGCCCG GACGCTGGAG CTGTCACTGC GCCGTCGGCT CATGGAGCAC
TTTCTCAAGA TGACGCCGCG CTTCTTTGAG CAGAACCGCA CGGGCGACCT CATGGCGCGA
TCGACCAATG ACCTGAACGC GGTCATGCAA ACGGCCGGAT TCGGCATCCT GACGCTCATC
GACTCGACGA CGTACTCGAC GACCATCCTC GTCACCATGG CCGTGCTCGA CGGTTGGAAG
CTGACCTTGT TCTCGCTCGT GCCCATGCCG TTCATCGCGC TCGCCATGAC GAAATTCGGC
CAGATCCTGC ACGACCGGTT CGAGCGGGCG CAGGATGCCT TCGGGGATAT GAACGATCGC
GTCCTGGAGA CGGTCGCCGG CATTCGCGTG GTGCGCGCCT ACGCGCAGGA GCAGAACGAG
GAGCGCCGCT TCGCTGAGAC GATGGCGGAC GTGTATCGGA AGAACATTGC CGTCGCGAAG
ATCGACGCCC TGTTCGATCC GACCATCAGC CTCCTCGTCG GCGTGACGTA CCTCATCGGC
CTGGGCTACG GCACGTACCT CGTCTTCCAG AGCCAGCTCA CCGTGGGTCA GCTCACGTCG
TTCAACGTCT ACCTGGGCAT GCTGATCTGG CCTATGCTCG CGTTTGGGCA GCTCATCAAC
ATCATGCAGC GCGGCAACGC GTCCTTGGAT CGCGTGAACG AGACGCTCGC GTACGAGCCC
GACGTGGTGG ACGCGGACGG GGCGGCGGAG GTGGCGCGCA TCGACGAGAT CCGCTTCGAA
GGCTACTCGT TCCGCTACCC GTCGTCCGAG CGGGACAACC TGGTGGACAT CGATCTCGTC
ATTCGCCGCG GCCAGACCCT CGGCATCGTG GGCAGGACGG GCAGCGGCAA GTCGACGCTC
GTCAAGCAAC TTCTGCGCGA GTATCCCGTG GGGCATCGCG GCCGCCTGTT GGTGAACGGC
CTACCCATTC AGGACGTCCG AATCGACGCG CTCCATCGGC TGATCGGCTA TGTCCCGCAG
AACCCGATGC TGTTCTCGCG CAGCGTGCGG GACAATGTCC GCTTTGCCAA GCACGACGCG
ACGGACGAAG AGGTCGTTCG CGCGCTTCAT CTCGCCGGAT TTGCGGAGGA CATTCCGCGG
CTCCCGGACG GGCTCGACAC GCTCGTCGGC GAACGGGGCA TTTCGCTGTC CGGCGGGCAG
AAGCAGCGAA TCGCGCTCGC CCGCGCGCTC ATTCTGGATC CCGATCTTCT CATTCTGGAC
GACGCGATGT CGGCCGTGGA CGCGCGAACG GAGGCGCACA TCCTGCGCTC CATCCGCCGC
GTGAGGCAGG GGCGCACCAC GCTCATCGTC AGCCACCGCA TGTCGGCCGT TCAGCACGCG
GACTACATCG TGGTGCTGGA TGACGGGCGG ATCGCAGAAG CGGGCACGTT TCAGGACCTC
ATGCGGCTCG GGGGTTGGTA CGCCAAGCAG TACCTGCATC AGCAGGCGTT TGGCGAAGCC
TCGGACGATC TCGCCGAAGA CGCGGAGGCA CCTGAAGAGG GCGCGCCAGG CGCGGCGCAA
CCGTCACTCA CCGGGGCGGA TAGGGGGGAT GTGCGATGA
|
|---|
| Protein sequence | MFQVLWKLRH FFWEERKRYG IAVGLLLFLN VIDVIPPYLV GRSIDLMSQH GMTLRALAEL
VGALLLTIVV SYVCGVTWQY QLYSGARTLE LSLRRRLMEH FLKMTPRFFE QNRTGDLMAR
STNDLNAVMQ TAGFGILTLI DSTTYSTTIL VTMAVLDGWK LTLFSLVPMP FIALAMTKFG
QILHDRFERA QDAFGDMNDR VLETVAGIRV VRAYAQEQNE ERRFAETMAD VYRKNIAVAK
IDALFDPTIS LLVGVTYLIG LGYGTYLVFQ SQLTVGQLTS FNVYLGMLIW PMLAFGQLIN
IMQRGNASLD RVNETLAYEP DVVDADGAAE VARIDEIRFE GYSFRYPSSE RDNLVDIDLV
IRRGQTLGIV GRTGSGKSTL VKQLLREYPV GHRGRLLVNG LPIQDVRIDA LHRLIGYVPQ
NPMLFSRSVR DNVRFAKHDA TDEEVVRALH LAGFAEDIPR LPDGLDTLVG ERGISLSGGQ
KQRIALARAL ILDPDLLILD DAMSAVDART EAHILRSIRR VRQGRTTLIV SHRMSAVQHA
DYIVVLDDGR IAEAGTFQDL MRLGGWYAKQ YLHQQAFGEA SDDLAEDAEA PEEGAPGAAQ
PSLTGADRGD VR
|
|---|
| |