| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0737 |
|---|
| Symbol | |
|---|
| ID | 8424229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 786888 |
|---|
| End bp | 788636 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645026853 |
|---|
| Product | pyrimidine-nucleoside phosphorylase |
|---|
| Protein accession | YP_003184170 |
|---|
| Protein GI | 258510736 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0213] Thymidine phosphorylase |
|---|
| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric
[TIGR02644] pyrimidine-nucleoside phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCGG TGGACGTGAT CGACAAGAAG CGAAGAGGGG AGGCTTTGGC GGAGGAGGAG
CTTCGGTTTC TCATCGAGGG GTACGTGGCT GGGAGAATCC CGGACTACCA GATGAGCGCC
TTTCTCATGG CGGTGGTCTG GCGAGGCATG ACCCGCGAGG AAACGCTTGC GCTCACGCGG
CTCTTGGCCG ATTCCGGCGA ACGGCTGGAT CTCTCGGGCA TCCCGGGCGT GAAGGTCGAC
AAGCACAGCA CCGGCGGCGT GGGAGACAAG GCGACGCTCG TCGTGTTGCC GCTCGTCGCG
TCCATCGGCG TGCCGGTCAT CAAGATGTCC GGGCGGGGGC TTGGTCACAC GGGAGGGACC
ATCGACAAGC TCGAGTCCAT CCCGGGATTT CGCACAAATC TGAGCGTGGC GGAACTCGTG
GCGCAGGTGA GGCAGGTGGG CATCGCGCTG GGAGGACAGA CCGCGGATCT GGCGCCGGCG
GACAAGAAGC TGTACGCGCT CCGGGACGTC ACGGGAACGG TGGAGTCGTT GCCCCTCATC
GCGAGTTCCG TGATGAGCAA GAAGCTGGCG GGCGGCGCCG ACGCCATCGT GCTCGACGTC
AAGGTGGGCG ACGGTGCGTT TATGAAGTCG CGCTCGGACG CGCGCAGGCT CGCGAGGCTG
ATGGTCGAAA TCGGCGAGGC GGCGGGCAGG CGGACGGTTG CCGTTCTCAG CAACATGGAC
CAGCCGCTCG GGTGCGCCAT TGGGAACGCG CTCGAGGTGG CCGAGGCCAT CCGCGTGCTG
TCCGGCGAGG GACCGTTCGA TCTCGCCGAG ATCGCGCTCG CCCTGGCGGA GGAGATGACC
GTGCTGGCGG GGGTCGCCGC GACGCGCGAG GAGGCGCGCC GCATGTTACG CCAATCGGTC
GCCGAAGGCC GGGCGCTCGA GACACTCCGG CGGTGGATTG CGGCGCAGGG CGGCGATCCG
GCCGTCGTCG ACGATCCAAG CCGTCTCCCG CAGGCGCCGG TCCAAATGCC CTATCTGCCG
AAGAAGGCCG GGTTTGTCGC CAAGCTGCCC GCGCTCGCGT TCGGGCTCGC GGCGATGCGG
CTTGGCGCGG GCCGGGAGAC GAAGGACGCG GCCATCGATC CGTCCGTCGG GATCGTGCTG
CATGCGAAGG TGGGCGACCG CGTCCAGACC CACCGCCCGA TGTTCACCGT GCACGCGCGC
ACGGAGGAGG ACGCCCTCCG CTGCATTCGG GAGATCGAGG AAGTCATGGA GATTTCGGAC
GATCCCGTCG AGGCGCCGCC GCTCATCCTC GCCCGGATCG ACCGAAGCGA GGCTCTGCCC
CACGCCGATC TGATGGAGGC CGCGCGAGAG GCGCGCGAGC GCGCGTATGT GCCGTACTCC
GGCTTCGCCG TGGGCGCGGC GCTTGAGCTT GCGGACGGGC GCATGGTGAC CGGCGCCAAT
GTCGAGAATG CGTCGTATGG GCTCACCAAC TGCGCGGAGC GGTCCGCGGT GTTTCGCGCC
GTCGCCGAGA GTGCGCCAGG CGCGAGGCCC GAGATTCGCG CGGTGGCCGT CATTGCGGAC
AGCCCGGAGC CGGTCTCTCC CTGCGGCGCG TGCCGGCAGG TGTTGGCCGA ATTCTGCCCG
CCCGACACGC CGGTCTACCT CGGGAATCTC CGGGGCGATG TGGTGGAGAT GACCGTCGGC
CAGCTTCTCC CGGGCGCGTT CACGGACGCG CAGATGGCAA ACGTCAGGCG GCAAGACAAG
GAGGCGTGA
|
|---|
| Protein sequence | MRAVDVIDKK RRGEALAEEE LRFLIEGYVA GRIPDYQMSA FLMAVVWRGM TREETLALTR
LLADSGERLD LSGIPGVKVD KHSTGGVGDK ATLVVLPLVA SIGVPVIKMS GRGLGHTGGT
IDKLESIPGF RTNLSVAELV AQVRQVGIAL GGQTADLAPA DKKLYALRDV TGTVESLPLI
ASSVMSKKLA GGADAIVLDV KVGDGAFMKS RSDARRLARL MVEIGEAAGR RTVAVLSNMD
QPLGCAIGNA LEVAEAIRVL SGEGPFDLAE IALALAEEMT VLAGVAATRE EARRMLRQSV
AEGRALETLR RWIAAQGGDP AVVDDPSRLP QAPVQMPYLP KKAGFVAKLP ALAFGLAAMR
LGAGRETKDA AIDPSVGIVL HAKVGDRVQT HRPMFTVHAR TEEDALRCIR EIEEVMEISD
DPVEAPPLIL ARIDRSEALP HADLMEAARE ARERAYVPYS GFAVGAALEL ADGRMVTGAN
VENASYGLTN CAERSAVFRA VAESAPGARP EIRAVAVIAD SPEPVSPCGA CRQVLAEFCP
PDTPVYLGNL RGDVVEMTVG QLLPGAFTDA QMANVRRQDK EA
|
|---|
| |