Gene Aaci_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0541 
Symbol 
ID8424031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp600665 
End bp601783 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content61% 
IMG OID645026662 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003183981 
Protein GI258510547 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTCA CCCGCACCAT CCGTGTTCGG CTTGAACCGA CGCCGGAACA AGCTTCTGCA 
CTGGCTCGCA CCGTCGAGGC CAATCGACAG GCCCTTGACT ACGTGAGCCG CATCGCTTTT
GAGCGCAAGA TCCGAAACCG TGTCGCCTTG CACCGCGCCG CGTACCGAAC CATTCGCACC
CGATTCGGTC TGCGTGCGCA GATGGCCTGC ACGGTGTGCC GCGTCGTCGC GGGCGTCTAC
AAGAGCATGA AGTCGAACGG GAATGAGGAC ACGCCCGCGG AGTTCAAACG AGCGAAGCCC
GTGTTCCAGT GGAACAAGGA CTACGTGCTG CGAAACGGCG TGGCGCACAT CACGACGATC
GACGGTCGGC TGCGGATCCC TTTCCGCGTG GAGCCTCCAT ACCGGCGGTA CTTGCAGGAC
GGCTGGACCT TCGGTGCAGC CGAACTGGTT CGGAAGCGAC ACGGCTGGTA TCTGCACGTG
TCCGTCTCCA AGTCGGTACC GGATCACGCC GACGATTTCG ACGCCGTGAT CGGCGTTGAC
CAGGGCATGC GCTTCCTTGT GACCGCTTCC TGCGGGGATC AGGTGATGTT CATTCGCGGT
GGCAGGGTCA AGCAGACCCG TCTCCGCTAC GTCCGTCTGC GCGCGTCTCT TCAGCGCAAA
GGCACTCGCT CGGCCAAGCG CCGTCTGAAG GCCATTGGCC GAAGAGAATC CCGTTTCATG
ACGGACGTCA ATCACCAGAT TGCCAAGGCC GTAGTCCGCT TCGCACAAGC CCAAGGTCAA
CGCCCGCTCA TTGTGCTCGA AGACCTCACA GGCAGCAACT TGTCCGTCCG GTTCCGGCTT
AAGGACCGAT ACTGGCGCAT GAGCTGGGCG TTTCGGCAGT TGACGGACTT CATCCGCTAC
AAGGCGGAAG AAGCCGGGAT CGCCGTTATG TTCATCGATC CGACGGGTAC AAGCGAGACC
TGCCCGAAGT GCGGGCACTG CGAAACCGCG AATCGAAGCC GCAAGCGTCA CGAATTCCGT
TGCAAGAAGT GCGGCTACCG TTGCAATGAC GACTTAGCCG CAAGCCGCGT GATCGCTCAA
AAAGGCCTGG AATGCTTGCG GCAGAGCCAG AGCGCATGA
 
Protein sequence
MELTRTIRVR LEPTPEQASA LARTVEANRQ ALDYVSRIAF ERKIRNRVAL HRAAYRTIRT 
RFGLRAQMAC TVCRVVAGVY KSMKSNGNED TPAEFKRAKP VFQWNKDYVL RNGVAHITTI
DGRLRIPFRV EPPYRRYLQD GWTFGAAELV RKRHGWYLHV SVSKSVPDHA DDFDAVIGVD
QGMRFLVTAS CGDQVMFIRG GRVKQTRLRY VRLRASLQRK GTRSAKRRLK AIGRRESRFM
TDVNHQIAKA VVRFAQAQGQ RPLIVLEDLT GSNLSVRFRL KDRYWRMSWA FRQLTDFIRY
KAEEAGIAVM FIDPTGTSET CPKCGHCETA NRSRKRHEFR CKKCGYRCND DLAASRVIAQ
KGLECLRQSQ SA