Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0517 |
Symbol | |
ID | 8424007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 573960 |
End bp | 575636 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645026642 |
Product | transposase IS4 family protein |
Protein accession | YP_003183961 |
Protein GI | 258510527 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGTATC ATGTGGACAT GTATATCCGC GTCATTCGCC GAAAAAACAA GAACGGTTCT GTTACCGGTT ACGTGCAGTT GGCCCATAAC TACCGCGATC CACAGACCGG TCAGCCGAAG GCCAAGGTCC TGTACACCTT CGGTCGTGAA GACGAAATGG ACCTGGAGGC GCTCCGGCGC CTTGCCCAGA GTATTCATCG CTTCGTGGGC GACGAGTTTA CCTCGGGGCG CGGCCAGTCG GAAGCCATCC AAACCACGCT GCTGGACAGC CGTCCCATGG GAGGGGCGTA TCTGCTGGAC GAGCTGTGGC GACAGCTTGA ATTGGACGAA GTCTTGCGCG AGCGGCTGGT CGACCGGAAG TTCAAGGCGG CTGTCGAGCG TGTCATCTTC GCCATGGTCG CGAATCGCGC GTTGGCGCCA AGCAGCAAGC TGGCCATGGA GGAGTGGGTC GAGCGCGAAG TGGCCCTTCC TGGTATGACC GAGTTGGACG TGTGGCAGGC GTACCGGGCC ATGGACGTTC TCCACGATGT GACAGAAGAG TTGCAATATG AGGTCTTCCG GCGGGTCAGC AATCTCTTGA ACTTGGACGT GGACCTCCTG TTCTTCGACA CGACGTCCAC GTACTTCGAA ACGGAGGACG AGCCCGAAGA CGGACTACGG CGCAAAGGAT ATTCGAAAGA CCATCGGCCC GATTTGCCAC AGGTGGTGAT CGGCCTTGCG GTGACACGAG ACGGCATCCC TGTCCGCTGT TGGACGTGGC CTGGGAACAC GGCGGATATG AGCGTGGTCG AAGAAGTCAA ACAGGGCCTC ATCGGATGGC GGCTTGGCCG GGTGATCACG GTTGTAGACC GCGGCTTCGT ATCGGAGAGC AATCTGCGGA TCCTGCAACG CGCCGGCGGT CACTACATCG CTGGGGAGAA AATGAACTCC GGGAAATCAG CGGTGGAAGT GGCCTTGGCG CGCCCTGGAC GTTTTCGTGA GCTTCGTCCG AACCTGAAGG TGAAGGAGGT TGTGGTGGGA GACGGTGAGG CCCGGGTCCG TTACGTGTTG GCGTTCAATC CCGAGGAAGC CAAACGCGAT GAGGCGCGCC GAGAGGCGAT GTTGCGCGAG CTTCGGATGG AGTTGGAACG CCTCAAGGAG CTTCAGGGCG AAGCGCACAC GAAAGCGCAC TGTCGGCTTG CGAGCCATCC AACGTTCAAG CGCTATCTGA AACAGGACCG ATGGGGGAAC CTGAGAATTG ACCCGGAGGC CGTGCGGCAA GCGGCTCATC TGGACGGGAA GTACCTGATC CGCACCTCCG ACGACACGCT GTCGACGGAA GATGTCGCGC TGGGATACAA GCAACTCCTG ATGGTGGAGT CCGCGTTTCG CACACTGAAG ACGACGTTGG ACATCCGTCC CATGTATCAC CGGAAGGACG AGCGGATCCG TTCGCATGTG CTGCTTTGCT GGCTGGCCTT GTTGCTGGTG CGCATCGCCG AAGTCCAAAC AGGGCGCTCC TGGCCCGACA TCCGCTCCCA CATGCAAGCG ATGCACCAGG TGACCAAGAG CACCCCAGAT GGGATCGTCG TGCAGCGCAC AGAAACGACC GAGGTACAGT GGGAAATCCT GCGAGCGCTA CGGATCACGG AGCCACCAAG AATTCTGCGC ATGGAACCTC GAACACGAGG GCTGTAG
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Protein sequence | MSYHVDMYIR VIRRKNKNGS VTGYVQLAHN YRDPQTGQPK AKVLYTFGRE DEMDLEALRR LAQSIHRFVG DEFTSGRGQS EAIQTTLLDS RPMGGAYLLD ELWRQLELDE VLRERLVDRK FKAAVERVIF AMVANRALAP SSKLAMEEWV EREVALPGMT ELDVWQAYRA MDVLHDVTEE LQYEVFRRVS NLLNLDVDLL FFDTTSTYFE TEDEPEDGLR RKGYSKDHRP DLPQVVIGLA VTRDGIPVRC WTWPGNTADM SVVEEVKQGL IGWRLGRVIT VVDRGFVSES NLRILQRAGG HYIAGEKMNS GKSAVEVALA RPGRFRELRP NLKVKEVVVG DGEARVRYVL AFNPEEAKRD EARREAMLRE LRMELERLKE LQGEAHTKAH CRLASHPTFK RYLKQDRWGN LRIDPEAVRQ AAHLDGKYLI RTSDDTLSTE DVALGYKQLL MVESAFRTLK TTLDIRPMYH RKDERIRSHV LLCWLALLLV RIAEVQTGRS WPDIRSHMQA MHQVTKSTPD GIVVQRTETT EVQWEILRAL RITEPPRILR MEPRTRGL
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