Gene Aaci_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0517 
Symbol 
ID8424007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp573960 
End bp575636 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content60% 
IMG OID645026642 
Producttransposase IS4 family protein 
Protein accessionYP_003183961 
Protein GI258510527 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGTATC ATGTGGACAT GTATATCCGC GTCATTCGCC GAAAAAACAA GAACGGTTCT 
GTTACCGGTT ACGTGCAGTT GGCCCATAAC TACCGCGATC CACAGACCGG TCAGCCGAAG
GCCAAGGTCC TGTACACCTT CGGTCGTGAA GACGAAATGG ACCTGGAGGC GCTCCGGCGC
CTTGCCCAGA GTATTCATCG CTTCGTGGGC GACGAGTTTA CCTCGGGGCG CGGCCAGTCG
GAAGCCATCC AAACCACGCT GCTGGACAGC CGTCCCATGG GAGGGGCGTA TCTGCTGGAC
GAGCTGTGGC GACAGCTTGA ATTGGACGAA GTCTTGCGCG AGCGGCTGGT CGACCGGAAG
TTCAAGGCGG CTGTCGAGCG TGTCATCTTC GCCATGGTCG CGAATCGCGC GTTGGCGCCA
AGCAGCAAGC TGGCCATGGA GGAGTGGGTC GAGCGCGAAG TGGCCCTTCC TGGTATGACC
GAGTTGGACG TGTGGCAGGC GTACCGGGCC ATGGACGTTC TCCACGATGT GACAGAAGAG
TTGCAATATG AGGTCTTCCG GCGGGTCAGC AATCTCTTGA ACTTGGACGT GGACCTCCTG
TTCTTCGACA CGACGTCCAC GTACTTCGAA ACGGAGGACG AGCCCGAAGA CGGACTACGG
CGCAAAGGAT ATTCGAAAGA CCATCGGCCC GATTTGCCAC AGGTGGTGAT CGGCCTTGCG
GTGACACGAG ACGGCATCCC TGTCCGCTGT TGGACGTGGC CTGGGAACAC GGCGGATATG
AGCGTGGTCG AAGAAGTCAA ACAGGGCCTC ATCGGATGGC GGCTTGGCCG GGTGATCACG
GTTGTAGACC GCGGCTTCGT ATCGGAGAGC AATCTGCGGA TCCTGCAACG CGCCGGCGGT
CACTACATCG CTGGGGAGAA AATGAACTCC GGGAAATCAG CGGTGGAAGT GGCCTTGGCG
CGCCCTGGAC GTTTTCGTGA GCTTCGTCCG AACCTGAAGG TGAAGGAGGT TGTGGTGGGA
GACGGTGAGG CCCGGGTCCG TTACGTGTTG GCGTTCAATC CCGAGGAAGC CAAACGCGAT
GAGGCGCGCC GAGAGGCGAT GTTGCGCGAG CTTCGGATGG AGTTGGAACG CCTCAAGGAG
CTTCAGGGCG AAGCGCACAC GAAAGCGCAC TGTCGGCTTG CGAGCCATCC AACGTTCAAG
CGCTATCTGA AACAGGACCG ATGGGGGAAC CTGAGAATTG ACCCGGAGGC CGTGCGGCAA
GCGGCTCATC TGGACGGGAA GTACCTGATC CGCACCTCCG ACGACACGCT GTCGACGGAA
GATGTCGCGC TGGGATACAA GCAACTCCTG ATGGTGGAGT CCGCGTTTCG CACACTGAAG
ACGACGTTGG ACATCCGTCC CATGTATCAC CGGAAGGACG AGCGGATCCG TTCGCATGTG
CTGCTTTGCT GGCTGGCCTT GTTGCTGGTG CGCATCGCCG AAGTCCAAAC AGGGCGCTCC
TGGCCCGACA TCCGCTCCCA CATGCAAGCG ATGCACCAGG TGACCAAGAG CACCCCAGAT
GGGATCGTCG TGCAGCGCAC AGAAACGACC GAGGTACAGT GGGAAATCCT GCGAGCGCTA
CGGATCACGG AGCCACCAAG AATTCTGCGC ATGGAACCTC GAACACGAGG GCTGTAG
 
Protein sequence
MSYHVDMYIR VIRRKNKNGS VTGYVQLAHN YRDPQTGQPK AKVLYTFGRE DEMDLEALRR 
LAQSIHRFVG DEFTSGRGQS EAIQTTLLDS RPMGGAYLLD ELWRQLELDE VLRERLVDRK
FKAAVERVIF AMVANRALAP SSKLAMEEWV EREVALPGMT ELDVWQAYRA MDVLHDVTEE
LQYEVFRRVS NLLNLDVDLL FFDTTSTYFE TEDEPEDGLR RKGYSKDHRP DLPQVVIGLA
VTRDGIPVRC WTWPGNTADM SVVEEVKQGL IGWRLGRVIT VVDRGFVSES NLRILQRAGG
HYIAGEKMNS GKSAVEVALA RPGRFRELRP NLKVKEVVVG DGEARVRYVL AFNPEEAKRD
EARREAMLRE LRMELERLKE LQGEAHTKAH CRLASHPTFK RYLKQDRWGN LRIDPEAVRQ
AAHLDGKYLI RTSDDTLSTE DVALGYKQLL MVESAFRTLK TTLDIRPMYH RKDERIRSHV
LLCWLALLLV RIAEVQTGRS WPDIRSHMQA MHQVTKSTPD GIVVQRTETT EVQWEILRAL
RITEPPRILR MEPRTRGL