Gene Aaci_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0384 
Symbol 
ID8423871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp437626 
End bp438672 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content62% 
IMG OID645026510 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003183832 
Protein GI258510398 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAGGG TGGTGGGGGT GGCCACCAGA ACGATGGCCT ACAGCGCGGA ACGGCTCAGG 
CACCTGTTCA ATGCGCTGAA CGACGGGATC ATCGTCATGG ACAAAGACCG CATCATAGTT
TTCATCAATC CATCGGCGAC GCGCATGACG GGTTGGGAAC TGGGCGATTG GATCCCGTAT
TGCAGGTATT GTGAAGCGCG CGAAGTGGGC CCGGGTAAAG AGCGGTGTTT TCTCGCCGGT
CAGACCGAAG TCTCGTATTT TGAGTCGGAA CTGCCGACGA AGGATGGGGC CTATGTCCCC
GTCGGCATGA GCCGCACGTT TCTTGAACCG TCTGGCGGCG AGGCCAGCCG CGACATGGTG
ATTGTCATCC GGGATGTCAC GCGCGAGCGG CAGGCGAAGG AGTTGGAGAT GCGAGCGCGG
CTGAACCGCA TGACGCTTGA GGTGCAGGAA CAGGAGCGCA AGCGCATCTC TCAGGAGCTG
CACGATGGGG TGAGCCAGTC CCTGTACGCG GTGGATCTCG GCATGGAGCA CCTCAAGCGC
CAGGCGCCAC CTCGTCTGCA CAGGGCGCTT GACGACCTGC GCGCGCAGGT CAAGCGGTGC
TCGCAAGAGG TTCGCGCGCT GTCGCACACG CTGTATCCGT CGCTCCTGTA CGATCTCGGC
CTCAGCGCGG CCATCCGCAT GTTGAGCGAC GAGATGTCGA CAAGCGGCTG TCGGATCGAG
GTCAGCCTGA ACAAGGAGTG GCCCGGTGGC GATCTCGGCG GCATCGCGAT CCACGTGTAC
CGCATTGTGC AAGAGGCGGT GCACAACGCG ATTTCACACG GGCGGGCGCG ACACATTCAG
ATTCACATGA CGTGCGCCGA GATGTGCGAA GTGGAAATCC GCGACGACGG GTGTGGCTTC
GACGCGGACC AGATCAAGCT GCTACCCGGC TACGGGTTGA AGAACATGCG CGAGCGCGCA
TCTGCGCTGC ATGGGGTGCT CGAGATCGAG AGTCAGCCCG GGCAAGGTAC GCGCGTTCGC
GTCATCTTTC CCAATCCGCT CGGCTGA
 
Protein sequence
MARVVGVATR TMAYSAERLR HLFNALNDGI IVMDKDRIIV FINPSATRMT GWELGDWIPY 
CRYCEAREVG PGKERCFLAG QTEVSYFESE LPTKDGAYVP VGMSRTFLEP SGGEASRDMV
IVIRDVTRER QAKELEMRAR LNRMTLEVQE QERKRISQEL HDGVSQSLYA VDLGMEHLKR
QAPPRLHRAL DDLRAQVKRC SQEVRALSHT LYPSLLYDLG LSAAIRMLSD EMSTSGCRIE
VSLNKEWPGG DLGGIAIHVY RIVQEAVHNA ISHGRARHIQ IHMTCAEMCE VEIRDDGCGF
DADQIKLLPG YGLKNMRERA SALHGVLEIE SQPGQGTRVR VIFPNPLG