Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0314 |
Symbol | |
ID | 8423801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 361999 |
End bp | 363348 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645026440 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_003183762 |
Protein GI | 258510328 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCGA GCGTGGTGGC GGACGTGTGG AAGCTGTATC AGGAGATCCT CGAATTCGCG CCGGTCGGCG TTCACGCGGT CGATCGCGAA GGGCGCACGC GGGTCTACAA CCGGGTGATG GGCGAGATCG ACGGGTACAG GCCGGACGAA GTGCTGGAGA AAAACGTGTT CGAACTGTAC GAGCTCGACG AGGAGACGAG CACGCTCTGG CGGGCGCTGA AGACGGGGCA TCCGGTGCAG ATTGACGAGC AGGTGTACGT GGCGCGCAAC GGGCGGCGCG TCGTGACGCA GAATCGCACG AAGCCGGTGG TCATCGCGGG CGAGATCATC GGCGCGATGG AGATTGCCGT GCCGCGCGAG GCGGGAGGCG CGCAGGAAGC GGCAGACGCG CGGATCAGGC GCCGATACTC GTTCGCGGAC ATCCTGGGCG AGAGCCGGGC CATGCAGAGG GCGCTCGATC TCGCCGAGCG CGCGGCGCGG ATGGACCTGC CCGTCCTCCT CGTGGGCGAG ACGGGCACGG GCAAGGAACT GTTCGCCCAG GCCATTCATG GGGCGAGCGC GCGCAAGCAC GGCCCGTTTT TGGCGCAAAA CTGCGCGGCC TGGCCAGAGG GGCTCGCGGA GAGTGTGCTC TTCGGCACGA GGCGGGGCGG ATTCACGGGC GCCGTGGATC GCGCGGGCGT GTTCGAGCTG GCCTGCGGGG GGACGCTGTT GCTCGACGAG GTGCACGCGA TGTCCCCCTC CGTGCAGGCG AAGCTGTTGC GCGCCCTCCA GGACGGCGAG GTGTGGCCGA TTGGCGCGAG GCGGTCCGTC CAGACGGACG TCCGCGTGAT CGCCGCGATG AACGTGCCGC CAAGCGCCGC GTTGAGCCGC GGGCTCGTGC GGCCGGATCT CCTGTACCGC ATCGGCGCCA TCGCCATTCA CCTGCCGCCG CTTCGGGAAA GGCCTGAGGA CATCCCGCTT TTGGCCCAGG CGTTTTTGCG CAGGTACGGA GAAGCGCGCG CCGTGCGCCT CTCGAGCGAC GCGATGGCCT TTTTGACGAG CCACGACTGG CCCGGGAATG TGCGCGAGCT CGAGCAGACC GTGCGATCCG CCCTGGCCCT CTGGCCGGAA GCGCGCGAAA TCACGTCCGA GATGCTGCGA TCCGCGCATC CGCTCCTCGG TGAAGGCGCG CCGCGCGAAT TGGAGCGTGT GGCGCGCGCC GCGCGCCCCT CGGACGACGC CATTCGCCGG GCGTACGAAG CGGCTTCGGG CAACCTGACC CACGCGGCGC AGGCGCTCGG CATCAGCCGG CAGCGCATGC AGTACCACGT GCGGCGGCTT GGGTTGAGAA CCTCGTCGCA GCCGAAGTGA
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Protein sequence | MEPSVVADVW KLYQEILEFA PVGVHAVDRE GRTRVYNRVM GEIDGYRPDE VLEKNVFELY ELDEETSTLW RALKTGHPVQ IDEQVYVARN GRRVVTQNRT KPVVIAGEII GAMEIAVPRE AGGAQEAADA RIRRRYSFAD ILGESRAMQR ALDLAERAAR MDLPVLLVGE TGTGKELFAQ AIHGASARKH GPFLAQNCAA WPEGLAESVL FGTRRGGFTG AVDRAGVFEL ACGGTLLLDE VHAMSPSVQA KLLRALQDGE VWPIGARRSV QTDVRVIAAM NVPPSAALSR GLVRPDLLYR IGAIAIHLPP LRERPEDIPL LAQAFLRRYG EARAVRLSSD AMAFLTSHDW PGNVRELEQT VRSALALWPE AREITSEMLR SAHPLLGEGA PRELERVARA ARPSDDAIRR AYEAASGNLT HAAQALGISR QRMQYHVRRL GLRTSSQPK
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