Gene Aaci_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0301 
Symbol 
ID8423788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp347055 
End bp348719 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content67% 
IMG OID645026427 
Producttype II secretion system protein E 
Protein accessionYP_003183749 
Protein GI258510315 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCGCA AGCGCATGGG TGAGTTGCTC GTGGAGTCGG GCATGCTCGC GCCGGAGCAG 
TTGGAGATGG CGCTCGCGGA GCAGCGGGAG ACCGGCGCTC GGCTCGGGGA CATTCTCATT
AACAACGGCT ACATCACCGA GCAGCAGCTC GTGGAAGTCC TCGAGTTTCA GCTCGGCATC
CCCCACGTCA TCCTGGCGAA CATGAAGATC GATCCCGAGG TGTTGAAGCT TGTCCCCGAA
CGCCTCGCGG AGACGTATGT CCTGATCCCG TATCGAAAGA GCGGGAATCG CCTGTACGTC
GCGATGGCCG ATCCGCTCGA TTACTACGCC ATCGACGATC TGCGCCGATC GACCAACCTC
GTCATCATGC CTGCCATCGC GACGCGCCAG GACATCCAGG CTGCCATCTC GCGCCACTAC
CGAGGCAACG AGGTCTTCGA GACGGCCGTG AAGTCCGTGG CCGAGGCCGC GCCGCCGCGC
GGGGAGCCCG AGCCCGAGAA CCGCGCCGAC TCGCCCGTCG TTCGCGCGCT CAATCAAATC
CTCATCGAGG CGGCGGACGC CGGCGCGTCC GACGTGCACC TGGATCCGCA GGCGGACGGG
GTGCTCCTGC GCTTCCGCGT CGACGGCTTT TTGCGCACGG AGCGCGTGAT TCCTCGCAAC
CTTCAGAGTG GCCTGGTGGC GCGCGTGAAG ATCTTGGCCC GGCTCAACAT CGCGGAGCAG
CGGCTGCCGC AGGACGGAAG GTTTGAGTTC GCGGAGGGCG GGCGCAAGGT CGACGTGCGC
GTCTCCACCA TGCCCACCGC GCACGGGGAA AAGGTCGTTT TGCGGATCTT CGATCTCGCC
AAGCGCGCCT TCAACCTGGA CGAGCTCGGC TTTTCGCCCG CCAATCGGGC GGCGTTCGAA
CGGATGATCA CGAAGCCGTA CGGCGCCGTG CTCATCACGG GGCCGACGGG ATCGGGCAAG
ACGTCGACGC TGTACGCGGC GTTGAAGCGG CTCGCGACGC CGGCGGTGAA CGTCATCACC
ATCGAGGATC CCATCGAGTA CCAACTCGAG GGTGTGAACC AGGTCCAGGT CAACCCGGCC
GCTGGGCTCA CGTTCGCGCG CGGCCTGCGT GCCATCCTGC GCCAGGATCC GGACATCATC
ATGGTGGGCG AGATCCGCGA CAATGAGACG GCCGAGATCG CCATGCGCGC CGCGCTCACG
GGTCACCGCG TCCTCTCGAC GCTGCATACG AACGACGCGG CCAGCGCCAT CAACCGGCTC
ATCGACATGG GCGTGCCGGC CTATATGATG GCCTCCGGCG TGACCGGCGT GGTGGCGCAG
CGTCTGGTGC GGCTCGTCTG TCCGCGCTGC AAGCACGAGC GCCCGGTGAC GCCGCTCGAG
CAGGAGCTTC TCGAGCAAAA CGGCTTCACC GCGGACAGGC TGGTCGAGGG ACGCGGCTGC
GCCGCCTGCG GCAATACGGG GTACAAGGGC CGCATGGCCG TGCAGGAGGT CCTGGAGGTG
GACGACGATC TCGCCCGGCT CGTGCTGACG TCTCGATCGA CGGAGGACTA CCTGCAAGCG
GCAAAGGAGC GCGGCATGCG GACGATGTTC CAGGACGGGC TGGAGAAGGC GCTGCAAGGC
AAGACGACGG TGCAGGAAGT GCTGCGCGTG ACGGCCGCGA CGTGA
 
Protein sequence
MARKRMGELL VESGMLAPEQ LEMALAEQRE TGARLGDILI NNGYITEQQL VEVLEFQLGI 
PHVILANMKI DPEVLKLVPE RLAETYVLIP YRKSGNRLYV AMADPLDYYA IDDLRRSTNL
VIMPAIATRQ DIQAAISRHY RGNEVFETAV KSVAEAAPPR GEPEPENRAD SPVVRALNQI
LIEAADAGAS DVHLDPQADG VLLRFRVDGF LRTERVIPRN LQSGLVARVK ILARLNIAEQ
RLPQDGRFEF AEGGRKVDVR VSTMPTAHGE KVVLRIFDLA KRAFNLDELG FSPANRAAFE
RMITKPYGAV LITGPTGSGK TSTLYAALKR LATPAVNVIT IEDPIEYQLE GVNQVQVNPA
AGLTFARGLR AILRQDPDII MVGEIRDNET AEIAMRAALT GHRVLSTLHT NDAASAINRL
IDMGVPAYMM ASGVTGVVAQ RLVRLVCPRC KHERPVTPLE QELLEQNGFT ADRLVEGRGC
AACGNTGYKG RMAVQEVLEV DDDLARLVLT SRSTEDYLQA AKERGMRTMF QDGLEKALQG
KTTVQEVLRV TAAT