Gene Aaci_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0293 
Symbol 
ID8423780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp337337 
End bp338806 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content63% 
IMG OID645026419 
ProductUDP-N-acetylmuramyl-tripeptide synthetase 
Protein accessionYP_003183741 
Protein GI258510307 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.826887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGTGTT GGGCGGATGA GTTGGAAAGG TTGCGGGCAC AAGGATGGAT TCGAGGGGTG 
GCCATCGACT CGCGCGAGGT GCGACCGGGG GACGTGTATG TGGCCATTCG CGGCCAACGC
GCAGATGGTC ACGCGTTCAT TGGCGAGGCC GTGTCGCGTG GAGCCGTCTG CGTCGTGGGC
GAGGAAGACG CCTCGTTGGT CGACGTGCCG CCGGACGTTC CGTATGTGCG AGTAACTTCC
GCTCGAAGGG CGGCCAGTGC GCTGTCGAAC AGGGTGTACG GTTTTCCGTC GCGCCATCTC
ACAGTGGTCG GCGTCACGGG GACAAACGGA AAAACCACGT CCGTGCACTG GCTGACGCAC
GTGTTGCGAT TCGCGGGCAT GCGCGTCGGC ATGCTGTCCA GCGTGTTCAA CGAGACCGGG
CTCCGAACGG TACCGGCGAA ACTGACGACG CTGGAAGCGC CCAAACTTCA TCGCGCGTTG
CGCGAGATGG TCGACGCGGG ATGTACCCAC GCCGTCATCG AGGTTTCGTC GCACGGCATC
GTCCAGCATC GCACATCGGA TGTGGACTTT GACCTCGCCA TCTTCACGAA TCTCACCCGG
GAACACTTGG ACTTTCACGG CTCGATGGAG AACTACGCGG CCGCAAAGGC CCGTCTCTTC
AGCGGACTTT CCGCGGAGAA GCCAGGCGCC ATTTTGAACC GGGACGACCC GTACGCCGAC
GTCATGGCCG AAAACTGCGT CGCCCCGATC GTCACGTACG GCGTGCGCTC GGGCGACGTG
CGCGGGCGCG TGGTCGAGAC GGACGGATGG CGCACTCGGG TGTCGATCCG GCTTCCGAAT
GGTGAAAAGC TCGAGGGCGT TCTTCATCAT CCTGGGATGT ACAACCTGTA CAACCTCCTC
GCGGTCGTCG CGGCCGCGTA CGTCTTGGGC GTGTCCGCGG ACGACATCGC CGGGGTGATT
CCGACGCTCC CTACAATCCC CGGCCGAATG CACGTCATCC GGCCGGAACA CGGCCCGACC
GTCATCGTGG ATTACGCCCA CACGCCAGAT GCGCTGCGCC AAATTCTCAG CACCGCGCGT
CAGTGGACAA GCGGACGTGT TTGGCTCGTG TTTGGCGGGC GCGGCGAGCG CGATCGAGGT
AAGCGACCCG AAATGGGGGC CATCGCGGCA TCCATGGCGG ATCACGTCTT GATCACCACC
GACAGTTCAT ATTCCGAGGA TCCCGAGCGC ATCGCCAACG AGATCTTGGC GGGGGCGCAG
CGAGTGCATC GTGCCCGGTG TGACGTGGTG CTGGATCGCG CGCAAGCCAT TGAGCGGGCC
GTCATCGAAG CGAACGACGA GGATGTCATT CTCATCACCG GCCGAGGTCA CGAGTCGTTT
CAGGTCGTCG GAGGTCTTCG TCTGGAGCAG ACCGATGCGG ACATGGTCCG CGAGGCGTTA
AGTCGGCGGC CGAACACAGG CGTGATTTGA
 
Protein sequence
MTCWADELER LRAQGWIRGV AIDSREVRPG DVYVAIRGQR ADGHAFIGEA VSRGAVCVVG 
EEDASLVDVP PDVPYVRVTS ARRAASALSN RVYGFPSRHL TVVGVTGTNG KTTSVHWLTH
VLRFAGMRVG MLSSVFNETG LRTVPAKLTT LEAPKLHRAL REMVDAGCTH AVIEVSSHGI
VQHRTSDVDF DLAIFTNLTR EHLDFHGSME NYAAAKARLF SGLSAEKPGA ILNRDDPYAD
VMAENCVAPI VTYGVRSGDV RGRVVETDGW RTRVSIRLPN GEKLEGVLHH PGMYNLYNLL
AVVAAAYVLG VSADDIAGVI PTLPTIPGRM HVIRPEHGPT VIVDYAHTPD ALRQILSTAR
QWTSGRVWLV FGGRGERDRG KRPEMGAIAA SMADHVLITT DSSYSEDPER IANEILAGAQ
RVHRARCDVV LDRAQAIERA VIEANDEDVI LITGRGHESF QVVGGLRLEQ TDADMVREAL
SRRPNTGVI