| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0279 |
|---|
| Symbol | |
|---|
| ID | 8423766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 317427 |
|---|
| End bp | 319217 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645026407 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_003183729 |
|---|
| Protein GI | 258510295 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5421] Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTCGCGC AAATTGTATC CACAAAGAAG CCCGACGGTA AGACCTACAA GTATCTCCAC
ATCGTTGAGT CCTACCGTGA AGGTCGGACG GTCAAGAAGC GGCGTGTCGC AAGCCTAGGC
AACATCAGTC AATATTCTGA GCGCGAAATC GAACAGATTA TCCGGACCCT CGAGTCTCTC
CTACAACATC GCACCACCGG TTCGCTCGAG GACTTCGAGG CCCAGCAGGT ACTCCATTTC
GGCGTTCCGT ATGTGGTGCA ATTTTTGTGG AACCAACTCG GGCTCACCGA GGCCATTCGT
GACGCCCTGC GTGCCCGCGA GGTCACCTTT GATGTCGCGC GGTACGTCCA AGCCATGGTC
ATTCATCGGC TCGTCGATCC CTCGAGTAAG CTTCGCCTCT TTCACACGCT GGACGATCTC
TATCTTCCCG ACTGGGGCGG GGAGCCGTGG CAGCTTCAGC ACTTCTATCG AGCGCTCGAC
TATCTTGTCG ACATCAAGCC TCAACTGGAA CGCGTGTTGT ACGCGCGACT GACAGACTTG
CTGAACTTCA GGCTCTCGTT GGTTCTGTAC GACTTGACCA GCACTCATCT CCACGGGCAC
GCCTGTCCCT TAGGAGAGCA TGGGTATTCG CGAACGCATC GCCCCGACCT CGAGCAGGTG
GAGCTTGGGC TCCTGGTGAC CCCTGAAGGC ATTCCCATCA CGCACGAAGT GTTCGCGGGC
AACGTGTCCG ACAAGCAAAC CGTGCCGGAC ATCTTGAAAC GTCTGAAGGA AGACTTTGCG
GTCGAGCAGT GCGTGTTCGT GGGTGACCGC GGCATGGTCA CGGAAAAGAA CATGGCCCTG
ATGGCGGAGG CGGGATTCCC GTACATTGTC GGGTTCCACA AGCGCGGGCG CATCGTGAGC
GACGCGTTGC TGGAACAGTT TGCAGACGTC AACGCCTACC ACGAACTGAA AGACAACCTG
CGCTACCTCG AGGTGCCCGC CGCAAGCGTG GACGACGTCG AAAAGGCCGA AGGCGTCCGA
TACATCCTTT GCTACAACCC GGAGAAAGCG CGTCAGGATG CCGCGTTTCG GGAGAGCGCG
CTGGAGGAGG CTGAAACGGG TCTGAAAGCT TTGGCGGAGA GCTTGGCGAA ACCGAAGCGC
GGCCGAAAGC CGACCGACAA AGGCGTCATG CTCAAGGTGG CGGACCTGTT GACCAGAAAA
GGGGTTGAAG CGTTTTTTCA GGTCGATTAC AAGGACGGCA TCCTGACGTA TCGGCGCGAT
GAGGACGCAA TCACCAAGGA AGCACTGCGC GACGGAAAGT TCCTGATTCG AACCAATACG
GATTTGCCTG CAGCCGACGT GGCCCAATCG TACAAGACGT TGATGGGGAT CGAACGTGCG
TTTCACCAAA TCAAAAACTT CCTGGATGTC GGGCCGATCT ATCACTGGAA TGAGCAGCGG
GTTCGCGGGC ACATCTTCGT CTGCGTGCTG GCCTACCTCT TCGAGCAGGA GATGCAAGTG
CTCTATCGCC GCCAATGGGC CCACGACAAG GCAGTGGCGG AAAGCCTTGC ATGCGTTGAA
GAGCAGGCCA AGGTGCTAGC CGAACTCGAG TCGCGGTGGT ACACCGGCGA AGCCATCGTA
CGGGAGCTGA GACGCTGGAA AGCGGTGCGC GCCACATTCT TGGACAAGGA GTTCGTCAGT
GTGACCAAAG CGACGGACCA GGCGAAGGCC ATCCTCACGA GCCTGGGCAT TCCGACGCCA
AACAAGACCT TGTCGGTGAC GAAAGTCCCA TCCATGACGC CGGACGAGTA A
|
|---|
| Protein sequence | MFAQIVSTKK PDGKTYKYLH IVESYREGRT VKKRRVASLG NISQYSEREI EQIIRTLESL
LQHRTTGSLE DFEAQQVLHF GVPYVVQFLW NQLGLTEAIR DALRAREVTF DVARYVQAMV
IHRLVDPSSK LRLFHTLDDL YLPDWGGEPW QLQHFYRALD YLVDIKPQLE RVLYARLTDL
LNFRLSLVLY DLTSTHLHGH ACPLGEHGYS RTHRPDLEQV ELGLLVTPEG IPITHEVFAG
NVSDKQTVPD ILKRLKEDFA VEQCVFVGDR GMVTEKNMAL MAEAGFPYIV GFHKRGRIVS
DALLEQFADV NAYHELKDNL RYLEVPAASV DDVEKAEGVR YILCYNPEKA RQDAAFRESA
LEEAETGLKA LAESLAKPKR GRKPTDKGVM LKVADLLTRK GVEAFFQVDY KDGILTYRRD
EDAITKEALR DGKFLIRTNT DLPAADVAQS YKTLMGIERA FHQIKNFLDV GPIYHWNEQR
VRGHIFVCVL AYLFEQEMQV LYRRQWAHDK AVAESLACVE EQAKVLAELE SRWYTGEAIV
RELRRWKAVR ATFLDKEFVS VTKATDQAKA ILTSLGIPTP NKTLSVTKVP SMTPDE
|
|---|
| |