| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0158 |
|---|
| Symbol | |
|---|
| ID | 8423624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 177274 |
|---|
| End bp | 178491 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645026268 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003183611 |
|---|
| Protein GI | 258510177 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00409231 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATTTCT CGTACTCCGA CAAAGTGGTG GCGCTGAAGC GCAGGCTTGA GGAATTCATG
GAGGAAGTCG TCTATCCCGG CGAGCGCATC TACTACGAGC AGCTCGCGTC CCAGCCGAGC
CGCTGGATGA TTCCCCCCAT CATGGAGGAG ATGAAGGCGA AGGCCAAGGC GGCGGGGCTC
TGGAACCTGT TTCTCCCGGA TAGCGAGTAC GGCGCCGGGC TCACGAACCT CGAGTACGCG
CCGCTCGCCG AGGTGATGGG CCGGTCGCCC ATCGCGCCGG AGGTGTTCAA CTGCAACGCC
CCGGACACGG GCAACATGGA GGTCCTCGTC CGCTACGGCA CACCCGAGCA GAAGGAGAAG
TGGCTGAAGC CGCTCCTCGC CGGCGAGATC CGCTCGTGCT TTTCCATGAC GGAGCCGGAG
GTGGCATCCT CCGACGCCAC CAACATTTCG GCGAGCATCG TCCGGGACGG AGACGAATAC
GTGATCAACG CGCACAAGTG GTGGTCGTCC GGCGCGGGCG ATCCGCGCTG CAAATTCGCC
ATCGTGATGG GGAAGACGAA TCCCGACGCG CCGAAGCACG AGCAGCAATC CATGATCATC
GTGCCGCTTG ACACACCAGG CGTCAAAATT GTCCGGACGC TCAACGTGTT CGGCTACGAC
GACGCACCTC ACGGACACGC CGAAATTGTG TTCGATCACG TGCGCGTGCC GAAGGAAAAC
CTCATCTGGG GCGAGGGCAA GGGATTCGCC ATCGCGCAGG GGCGGTTAGG GCCCGGGCGG
ATCCACCACT GCATGCGGCA GATTGGCATG GCGGAGCGGG CGCTCGAGCT CATGGTCCAG
CGCGTCAAGG AGCGCGTCGC GTTTGGGCGG CCGCTCGCGG AGCAGGGCGT CATTCGCGAG
TGGATCGCCG AGTCGCGCAT CGAGATTGAA CAGGCGCGGC TGCTCGTGCT GAAGGCCGCG
TACATGATGG ACACCGTGGG CAACAAGGCC GCGCAGAAGG AAATCGCCAT GATCAAGGTG
GTCGCGCCCA ACGTGGCGCA GCGCGTCATC GATCGCGCCA TTCAGGCGTT CGGCGCCGCG
GGCGTCAGCC AGGATACGCC GCTCGCCTAC ATGTGGACAC AGGCGCGCGT CATCCGGATT
GCGGACGGCC CGGACGAGGT GCACAAGCGC CACGTGGCGA GGCTCGAACT CGCCCAGGGG
GCGGAGCGGC CGAACTAG
|
|---|
| Protein sequence | MDFSYSDKVV ALKRRLEEFM EEVVYPGERI YYEQLASQPS RWMIPPIMEE MKAKAKAAGL
WNLFLPDSEY GAGLTNLEYA PLAEVMGRSP IAPEVFNCNA PDTGNMEVLV RYGTPEQKEK
WLKPLLAGEI RSCFSMTEPE VASSDATNIS ASIVRDGDEY VINAHKWWSS GAGDPRCKFA
IVMGKTNPDA PKHEQQSMII VPLDTPGVKI VRTLNVFGYD DAPHGHAEIV FDHVRVPKEN
LIWGEGKGFA IAQGRLGPGR IHHCMRQIGM AERALELMVQ RVKERVAFGR PLAEQGVIRE
WIAESRIEIE QARLLVLKAA YMMDTVGNKA AQKEIAMIKV VAPNVAQRVI DRAIQAFGAA
GVSQDTPLAY MWTQARVIRI ADGPDEVHKR HVARLELAQG AERPN
|
|---|
| |