Gene Aaci_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0075 
Symbol 
ID8423537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp94121 
End bp95446 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content66% 
IMG OID645026181 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003183528 
Protein GI258510094 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAG ATCGACTGTG GAAATCCGGC GCGCTCCTGG CGCTCGGACT TGTGGCGACG 
GGATGCGGTG CGCCCGCCGC AAACGGCGGC GGACAGGCGG CGACCGGCGC CAGCCGGGCC
GCGGCATCGA GCCAGCCCGT GACCATCACC TTCTGGTACG GCGTCGGCAC GACGCTCAGC
CAGGACATTC AGCAGATGGT GCAGGCGTTC AACCAGACCC ACCCCGGCAT CAAGGTCGTG
GCGACCTATC AAGGCAGCTA CTCCGGCGGC GGCGAGGAAC AGCAGAAGCT GCTCGCGGCC
ATCAAGGCGG GCGATCCGCC CACCATCGCA CAAATTGAGG TGCACGCGAT GCCGGTTTTC
GCGGCGAGCG GGCAATTGCT CGACCTCACC AACCTGATGC AGTCTTCGAG CGTCGACAAG
CCGTCCAACT TCCTGCCGGG CATCCTCGTC TCGACCCAGT ACCAGGGCCG ATACTACGCG
GTGCCCTTCA ACCGCAGCGT GCCCGTGCTC TACTACAACA AGACGCTCTT CGCGAAGGCG
CACATCGCCT CGCCCCCCTC GAACTGGGCG CAGCTCGCGG CGGACGCGAA GAAGCTCACG
AGCGGGGCCG GATCGAACAA GATCTACGGT TTCGAACCGC TCGTCGACTG GTGGCCGTGG
GAATACGCGG TGGAGTCAGG CGGCGGCTCC ATCCTGTCGC CCGATTTGAA GCGCGCCACC
TTCGACCAGC CGCCCGCGCT CTCCATCCTC GAGACGGAGC AGTCGCTCGT GAAGCAGGGA
TACGCCAAGG TCGAGACGGG ACCGAACTAC TGGGACCTCA TGACGCAGGA CTTCATCAAC
GGCCAAGTGG CCATGGACAT CGACTCCATC GGCAGCGCGG GCAAGGTGAC GAAGGGCGTG
GGCGACAAGT TCCAGTGGGG CACCGCGCTC CTGCCGCGCG GCAAGACGCT CGCCGTCCCG
CCGGGCGGTG GCGATCTCGC CATCTTCAAG GACGCCACGC CCGCGCAACA GAAGGCCGCG
TGGACGTTCA TCCAGTGGTG GACCGCGCCC AAGCAGTCGG TCCAATGGTC CACCGAGACC
GGTTACCTGC CCGTGCAGAA GGCGGATCTG AACGACCCCG TCTACCAGGC GTACCTCGAG
AAGCACCCGC AGTACCGGAC CGCCATTGAG GAGCTCCAGT ACGAGCATCC GTCGCCGGCG
TCCCCCGCGT ACCTGGCCGT GCTGCAGCCG GTGCAACAGG CGCTGCAAGG CATCTTCGAC
GAGGGCAAGC CCGTCGCGGC CACGATGCAT CAGGCCGCAG AGGCCGCCGA TCAAAACCTC
GGATGA
 
Protein sequence
MKRDRLWKSG ALLALGLVAT GCGAPAANGG GQAATGASRA AASSQPVTIT FWYGVGTTLS 
QDIQQMVQAF NQTHPGIKVV ATYQGSYSGG GEEQQKLLAA IKAGDPPTIA QIEVHAMPVF
AASGQLLDLT NLMQSSSVDK PSNFLPGILV STQYQGRYYA VPFNRSVPVL YYNKTLFAKA
HIASPPSNWA QLAADAKKLT SGAGSNKIYG FEPLVDWWPW EYAVESGGGS ILSPDLKRAT
FDQPPALSIL ETEQSLVKQG YAKVETGPNY WDLMTQDFIN GQVAMDIDSI GSAGKVTKGV
GDKFQWGTAL LPRGKTLAVP PGGGDLAIFK DATPAQQKAA WTFIQWWTAP KQSVQWSTET
GYLPVQKADL NDPVYQAYLE KHPQYRTAIE ELQYEHPSPA SPAYLAVLQP VQQALQGIFD
EGKPVAATMH QAAEAADQNL G