Gene Aaci_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0044 
Symbol 
ID8423506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp55675 
End bp56349 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID645026150 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003183497 
Protein GI258510063 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACCA TCCTCGTGGC CGACGACGAG CCTCACATCC GCGAACTCGT GCGCAGCACG 
CTGGAGCGGG AGGGGCATCG GGTGGTGGAG GCGGCGGACG GGCGCGAGGC GGCGGATGCG
GTGGCCCGTG AGCCGGTGCA GCTCGCCGTG ATCGACGTGA TGATGCCGGA GGTGGACGGG
TTCGAGCTGA CGCGGTGGTT GCGCGAAGAG CGCGATGTGC CGATTCTGCT CCTGACCGCG
CTCGGGGAGA CAAGCCACAA GGTGCGCGGC CTCCGGCTCG GCGCGGACGA CTACCTCGTC
AAGCCGTTCG CCCCCGAGGA GCTCGTGGCG CGCGTCGAGG CGCTCCTGCG CCGCTACCGC
ATTCGGGCGG ACGGCGCGCT CGATCTCGCC GTACTCCGTC TCCTCTCGGA CACGTATGAA
GTCGAGGCGA ACGGGGAGCG CATGGCGCTT CCGCCGAAGG AGTTTCAGCT TCTGTTCACG
CTGGCCGCGT CGGCGGGCAG GACGCTCTCC CGCGACAAGC TGATTGAAGA GGTGTGGGGG
TACGACTACG CGGGGGACGA GCGGACGGTG GACGTGCACA TCAAGCGGTT GCGCGTCAAG
TTCCCCGAGG ACGTGTATCC GTTTCGCATC CGCACCGTGC GCGGGTTGGG CTATCGCCTG
GAGGTGAACG CGTGA
 
Protein sequence
MATILVADDE PHIRELVRST LEREGHRVVE AADGREAADA VAREPVQLAV IDVMMPEVDG 
FELTRWLREE RDVPILLLTA LGETSHKVRG LRLGADDYLV KPFAPEELVA RVEALLRRYR
IRADGALDLA VLRLLSDTYE VEANGERMAL PPKEFQLLFT LAASAGRTLS RDKLIEEVWG
YDYAGDERTV DVHIKRLRVK FPEDVYPFRI RTVRGLGYRL EVNA