| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0043 |
|---|
| Symbol | |
|---|
| ID | 8423505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 54513 |
|---|
| End bp | 55526 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645026149 |
|---|
| Product | daunorubicin resistance ABC transporter ATPase subunit |
|---|
| Protein accession | YP_003183496 |
|---|
| Protein GI | 258510062 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCTC TCAAAACGCC GACGAATCGC CTCACAGCCG CCACGGGCGC CGACGCGCTC
GCCATCGAAG CGGTCGATCT CGTCAAGGCC TTCGGTCCAC ATCGCGCCGT CGACGGCGTC
AGCCTGTCCG TGCAGGTCGG CACGGTGTAC GGCCTGCTCG GCCCCAACGG GGCCGGCAAG
ACGACCACGG TGCGCATGCT CGCGACGCTT CTGCGCCCAG ACGCAGGTGC GGCGCGCATC
TTCGGCCACG ACGTCGTGAA GGACGCGCAA CGCGTGCGCC AGCTCATCGG CGTGACCGGT
CAGTATGCCT CCGTCGACGA GACGCTCACC GCCGCGGAAA ACCTGGTGCT CTTCGCGCGC
CTCCTCGGCC AGAGCCGCCG CGAGGCGCGG GCGACGACAG AGCGCCTGCT CGGACAGTTC
GGCCTCACCG AGGCGCGCAA TCGCCCGCTG AAGCAGTTTT CCGGCGGCAT GCGGCGCCGC
CTGGATCTGG CGGCCAGCCT CATCGCCACG CCGCCGCTCA TCTTCCTTGA CGAACCCACC
ACCGGCCTCG ATCCGCGCAC CCGCGCCCAA ATGTGGGACA CCATCCGGCA GCTCGTGCGC
GAAGGCACAA CCGTGCTCCT GACCACGCAA TATTTGGACG AGGCGGACCA GCTGGCGAAT
CGAATCGCCG TGATCGATCG CGGCCGCGTC ATTGCGGAAG GCACGCCGGA CGAGCTGAAG
TCGTCGGTGG GACGGTCCTC CCTGCACCTC ACCTTCGCCA ACCCGGAGGA CGTGCCGCGG
GCTCGCGCCC TCGTGGAAGC GGCGCTTGGC GCGCAGGCCA CGCCATCGCC CGAGGGGCGC
CGGATCATCG CGCCCTTGGC CGACACGAGC GTCGTGCCGG ATCTGCTCGT GGCGCTGAGG
GCGGCCGGCA TCGACATCAC CGAACTCGGC GTGCAAAAGC CGACGCTGGA CGAGGTGTTC
CTCGCCCTCA CCGGCCACGA GGCCGAAACC GCCGACGAAG GAGAGAGTGA CTGA
|
|---|
| Protein sequence | MQSLKTPTNR LTAATGADAL AIEAVDLVKA FGPHRAVDGV SLSVQVGTVY GLLGPNGAGK
TTTVRMLATL LRPDAGAARI FGHDVVKDAQ RVRQLIGVTG QYASVDETLT AAENLVLFAR
LLGQSRREAR ATTERLLGQF GLTEARNRPL KQFSGGMRRR LDLAASLIAT PPLIFLDEPT
TGLDPRTRAQ MWDTIRQLVR EGTTVLLTTQ YLDEADQLAN RIAVIDRGRV IAEGTPDELK
SSVGRSSLHL TFANPEDVPR ARALVEAALG AQATPSPEGR RIIAPLADTS VVPDLLVALR
AAGIDITELG VQKPTLDEVF LALTGHEAET ADEGESD
|
|---|
| |