Gene Aaci_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0012 
Symbol 
ID8423473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp17733 
End bp18617 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID645026118 
Productpyridoxal biosynthesis lyase PdxS 
Protein accessionYP_003183466 
Protein GI258510032 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0214] Pyridoxine biosynthesis enzyme 
TIGRFAM ID[TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.399865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATG TCGGCACGGA TCGCGTGAAG CGCGGTATGG CGGAGATGCA GAAGGGCGGC 
GTCATCATGG ACGTCGTCAA CGCGGAACAG GCGAAGATCG CGGAGGCGGC CGGCGCCGTC
GCGGTCATGG CGCTGGAGCG GGTTCCGTCG GATATCCGCA AAGCCGGCGG CGTAGCCCGT
ATGGCCGATC CGGCCATCAT TGAAGAGGTC ATGAACGCCG TCTCCATCCC GGTCATGGCG
AAGTGCCGCA TTGGGCACAT CGTGGAGGCG CGCATTCTCG AGGCGATGGG CGTCGACTAC
ATCGACGAGA GCGAGGTGCT CACGCCGGCC GACGAGAAGC ACCACATCGA CAAGACGAAG
TTCACCGTTC CCTTCGTCTG CGGCGCGCGC GATCTCGGCG AAGCGCTGCG CCGCATCGCC
GAGGGTGCGT CGATGATCCG CACCAAGGGC GAGCCGGGCA CGGGCAACAT CGTCGAGGCT
GTGCGCCATC AGCGCATGAT GCAGTCCGCC ATTCGCCGCG TTCAGGCGAT GTCCGAGGAC
GAGTTGTACG CCGAGGCGAA GAATCTCGGC GCGCCGTATC ATCTTCTCAA GCAGGTGCAC
GATCTCGGCC GCCTGCCGGT CGTCAACTTC GCGGCGGGCG GCATCGCGAC GCCCGCCGAC
GCCGCGCTCA TGATGGAGCT CGGCTCGGAC GGCGTGTTCG TGGGATCCGG CATCTTCAAG
TCCGAGAATC CAGAGAAGTA CGCGCGCGCC ATCGTCCAGG CCGTGACGCA TTATCAGGAT
TACGAACTGT TGGCGCACCT GTCCAAGAAC CTCGGGCAGG CCATGCAGGG CATCGATCTC
GCCACCTTGC GCGAGGAGGA GCGCATGGCG GTTCGCGGTT GGTGA
 
Protein sequence
MSNVGTDRVK RGMAEMQKGG VIMDVVNAEQ AKIAEAAGAV AVMALERVPS DIRKAGGVAR 
MADPAIIEEV MNAVSIPVMA KCRIGHIVEA RILEAMGVDY IDESEVLTPA DEKHHIDKTK
FTVPFVCGAR DLGEALRRIA EGASMIRTKG EPGTGNIVEA VRHQRMMQSA IRRVQAMSED
ELYAEAKNLG APYHLLKQVH DLGRLPVVNF AAGGIATPAD AALMMELGSD GVFVGSGIFK
SENPEKYARA IVQAVTHYQD YELLAHLSKN LGQAMQGIDL ATLREEERMA VRGW