Gene Aaci_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0003 
Symbol 
ID8423461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2828 
End bp3058 
Gene Length231 bp 
Protein Length76 aa 
Translation table11 
GC content62% 
IMG OID645026106 
ProductS4 domain protein YaaA 
Protein accessionYP_003183457 
Protein GI258510023 
COG category[S] Function unknown 
COG ID[COG2501] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02988] S4 domain protein YaaA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0313437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTTC ACATTCGCGG AGAGCACATC ACATTGGGTC AACTGTTGAA AAAGGTGCAG 
ATTGTGGCCT CGGGCGGAGA GGTCAAGTCG TTTCTGGCCG AAGGGCGGGT GCGCGTCAAC
GGCGCCATGG AGACGCGTCG CGGCAGGAAA CTGCGCGATG GCGACGAGGT CGAGGTGGAA
GGCGCGGTGT ATCGCGTGGT GAGCGAGCCG GATGGACATC CGCCGCGTTG A
 
Protein sequence
MDVHIRGEHI TLGQLLKKVQ IVASGGEVKS FLAEGRVRVN GAMETRRGRK LRDGDEVEVE 
GAVYRVVSEP DGHPPR