Gene ANIA_11217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagANIA_11217 
Symbol 
ID
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameAspergillus nidulans FGSC A4 
KingdomEukaryota 
Replicon accessionBN001308 
Strand
Start bp81543 
End bp83525 
Gene Length1983 bp 
Protein Length620 aa 
Translation table 
GC content55% 
IMG OID 
ProductMFS toxin efflux pump (AflT), putative (AFU_orthologue; AFUA_1G12620) 
Protein accessionCBF87265 
Protein GI259488081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.410395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.00637079 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAGTCCA GCCTGCTTGG CCGAATGACA GGCGTCACAG GCAGCAGAAG CAAGCGCCAC 
ACTAAGTTTC GCCTTCGGCG TCTTCAGCAA CCGCCCACCG AGTCAACCAC CAGACTTGCG
AGCCCGGACG ACGCCCAACC CATTGAGGAG ACGAAATCGC AGGAGCACCT CGAGCAAAGT
GCTACTCAGG GCCTAAGCGA AGCATCCGGT GATAACAATG CAGGGGGTGC CCATCCAACG
CCAGCGCCGA ACGAGGGAGA TGCGCCCACG GTGGCCGAGC TCCAACATGG TTCAAATGAC
CGGGTCGACG ACGGCACAAG TGGCTCTGGT ACTGTATCAG GCTGGAAACT CGCCGCTGTT
CTCATTGGAT TATCACTGGC GGTGTTCTGC ATGTCCCTAG TACGTCCTGG AACCAACCAC
ATTCTCCGCA TCAAGGATGT ACTCTAACAG ATCAATGTCC AGGACAGCAC AGTGCTATCA
ACTGCAATCC CCAAGATCAC TGCTGAATTC AACTCGCTAC ACGACATGGC CTGGTACGTG
AGTGCATACA ACCTGACGAT AAGCAGCTTC AGCCTCGTCT ACGGCAAGAT CTACAGCTTG
TACAGAGTGA AATGGGTATA CCTGACAACG CTATTTTTGT TTGAAGCCGG CTCACTAGTC
TGCGGCGCCG CACCCAGTTC CCTTGCCCTC ATCATCGGCC GCGCCATTGC CGGCGTTGGT
GGCGCAGGGG TATTCCTCGG CTCCATGCTT ATTGTCCACG AAATCATGCC GCTCCATCAA
GTGCCACTGT TTATCGCCCT TATTAGCGGT CTGTACGGTA TCGCTAGCGT CGTGGGTCCC
CTTCTTGGTG GCGTATTCAC CGACTACGTC AGCTGGCGCT GGTGCTTCTA TATCAATTTG
CCCATTGGAG GGTTGACAGC GTTTATCATT GTTCTGTTCG TCAGGCCGCG GGTCCGCGAA
AAGGCTACAG TAAAGAAAAC CCCCTGGGCG CAGTTGCTTG ATCTTGATCC CCTCGGTATT
ATTCTCATCC TTCCCGCCGT CATGTGCATG TTGCTCGTAC TTCAATGGGG TGGGGCAAAA
TACGCCTGGA GCAACTGGCG CATCATCGTG CTTTTGGTCA TGGCGGGCTC TCTGGCGTTG
ACCTTTACTG CTGTGCAACT GTGGCAGGGC GAGAGGGCTA CGATTCCGCC ACGAATAGTC
CGGAATCGCA GTGTCTGGGG TGCAATAGCC TTTTCGGTTT GCATTTACGG CTCCTTCACG
GTCTTTACGT ATTATGTGAG AACACCCCCT TGCTACTGAA TCCGGATGCT AACATGGATA
TGTGCTTGCC AGCTCCCCAT TTGGTTCCAG GCCATCAAAT CTGTCTCCGC AACGCGCTCG
GGGGTGATGA ATCTTCCCAT GATCCTCGGC GTAGTTGTAT GTTCGATGCT CTCTGGCTGG
GGCGTCAGCC GGGTTGGCTA CTACGTGCCG TTTATGTACA TGGCACCGGT GGTCGGATCT
ATTGGCGCGG GACTGCTCAC GACACTGCAC GTCTTTTCCG GACCGGCTGC CTGGATCACA
TACCAGCTGT TATTGGGCGT CGGCATCGGA TCCGGCATGG CGCTCCCCCT TGTCGCTGTA
CAGACTGCTC TCCCTACCGA CGACGTCTCG ACGGGCTCCG CCATCATCAC ATTTACTCAG
TCTCTTTCGG GCGCGTTATT TAACTTTGTG GCCCAAAGTG TCTTCCAGAG TCGCCTTGTG
CATAACCTGA ATGCGGCGCT TCCAGGAGTG GATACGGCGA GGGTGGCTGA TGTTTCTCCG
AGGGAGATAC GCAATGCAAT TGAGCCCGAG TACCTCCCTC AAACTCTGGA AGCATACAGT
CTAGCAATTA CACAGGTGTT TTATGCCGGC ACTGCGCTAT GCACCCTAGC ACTGTTTGGG
GTGCTGCCGA TCAAGTGCCT GTCCGTCAAG GGATCGAGAA TCCCGCCCAT GGCGCATGCT
TGA
 
Protein sequence
MQSSLLGRMT GVTGSRSKRH TKFRLRRLQQ PPTESTTRLA SPDDAQPIEE TKSQEHLEQS 
ATQGLSEASG DNNAGGAHPT PAPNEGDAPT VAELQHGSND RVDDGTSGSG TVSGWKLAAV
LIGLSLAVFC MSLDSTVLST AIPKITAEFN SLHDMAWYVS AYNLTISSFS LVYGKIYSLY
RVKWVYLTTL FLFEAGSLVC GAAPSSLALI IGRAIAGVGG AGVFLGSMLI VHEIMPLHQV
PLFIALISGL YGIASVVGPL LGGVFTDYVS WRWCFYINLP IGGLTAFIIV LFVRPRVREK
ATVKKTPWAQ LLDLDPLGII LILPAVMCML LVLQWGGAKY AWSNWRIIVL LVMAGSLALT
FTAVQLWQGE RATIPPRIVR NRSVWGAIAF SVCIYGSFTV FTYYLPIWFQ AIKSVSATRS
GVMNLPMILG VVVCSMLSGW GVSRVGYYVP FMYMAPVVGS IGAGLLTTLH VFSGPAAWIT
YQLLLGVGIG SGMALPLVAV QTALPTDDVS TGSAIITFTQ SLSGALFNFV AQSVFQSRLV
HNLNAALPGV DTARVADVSP REIRNAIEPE YLPQTLEAYS LAITQVFYAG TALCTLALFG
VLPIKCLSVK GSRIPPMAHA