Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_11217 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001308 |
Strand | - |
Start bp | 81543 |
End bp | 83525 |
Gene Length | 1983 bp |
Protein Length | 620 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | MFS toxin efflux pump (AflT), putative (AFU_orthologue; AFUA_1G12620) |
Protein accession | CBF87265 |
Protein GI | 259488081 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.410395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00637079 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGTCCA GCCTGCTTGG CCGAATGACA GGCGTCACAG GCAGCAGAAG CAAGCGCCAC ACTAAGTTTC GCCTTCGGCG TCTTCAGCAA CCGCCCACCG AGTCAACCAC CAGACTTGCG AGCCCGGACG ACGCCCAACC CATTGAGGAG ACGAAATCGC AGGAGCACCT CGAGCAAAGT GCTACTCAGG GCCTAAGCGA AGCATCCGGT GATAACAATG CAGGGGGTGC CCATCCAACG CCAGCGCCGA ACGAGGGAGA TGCGCCCACG GTGGCCGAGC TCCAACATGG TTCAAATGAC CGGGTCGACG ACGGCACAAG TGGCTCTGGT ACTGTATCAG GCTGGAAACT CGCCGCTGTT CTCATTGGAT TATCACTGGC GGTGTTCTGC ATGTCCCTAG TACGTCCTGG AACCAACCAC ATTCTCCGCA TCAAGGATGT ACTCTAACAG ATCAATGTCC AGGACAGCAC AGTGCTATCA ACTGCAATCC CCAAGATCAC TGCTGAATTC AACTCGCTAC ACGACATGGC CTGGTACGTG AGTGCATACA ACCTGACGAT AAGCAGCTTC AGCCTCGTCT ACGGCAAGAT CTACAGCTTG TACAGAGTGA AATGGGTATA CCTGACAACG CTATTTTTGT TTGAAGCCGG CTCACTAGTC TGCGGCGCCG CACCCAGTTC CCTTGCCCTC ATCATCGGCC GCGCCATTGC CGGCGTTGGT GGCGCAGGGG TATTCCTCGG CTCCATGCTT ATTGTCCACG AAATCATGCC GCTCCATCAA GTGCCACTGT TTATCGCCCT TATTAGCGGT CTGTACGGTA TCGCTAGCGT CGTGGGTCCC CTTCTTGGTG GCGTATTCAC CGACTACGTC AGCTGGCGCT GGTGCTTCTA TATCAATTTG CCCATTGGAG GGTTGACAGC GTTTATCATT GTTCTGTTCG TCAGGCCGCG GGTCCGCGAA AAGGCTACAG TAAAGAAAAC CCCCTGGGCG CAGTTGCTTG ATCTTGATCC CCTCGGTATT ATTCTCATCC TTCCCGCCGT CATGTGCATG TTGCTCGTAC TTCAATGGGG TGGGGCAAAA TACGCCTGGA GCAACTGGCG CATCATCGTG CTTTTGGTCA TGGCGGGCTC TCTGGCGTTG ACCTTTACTG CTGTGCAACT GTGGCAGGGC GAGAGGGCTA CGATTCCGCC ACGAATAGTC CGGAATCGCA GTGTCTGGGG TGCAATAGCC TTTTCGGTTT GCATTTACGG CTCCTTCACG GTCTTTACGT ATTATGTGAG AACACCCCCT TGCTACTGAA TCCGGATGCT AACATGGATA TGTGCTTGCC AGCTCCCCAT TTGGTTCCAG GCCATCAAAT CTGTCTCCGC AACGCGCTCG GGGGTGATGA ATCTTCCCAT GATCCTCGGC GTAGTTGTAT GTTCGATGCT CTCTGGCTGG GGCGTCAGCC GGGTTGGCTA CTACGTGCCG TTTATGTACA TGGCACCGGT GGTCGGATCT ATTGGCGCGG GACTGCTCAC GACACTGCAC GTCTTTTCCG GACCGGCTGC CTGGATCACA TACCAGCTGT TATTGGGCGT CGGCATCGGA TCCGGCATGG CGCTCCCCCT TGTCGCTGTA CAGACTGCTC TCCCTACCGA CGACGTCTCG ACGGGCTCCG CCATCATCAC ATTTACTCAG TCTCTTTCGG GCGCGTTATT TAACTTTGTG GCCCAAAGTG TCTTCCAGAG TCGCCTTGTG CATAACCTGA ATGCGGCGCT TCCAGGAGTG GATACGGCGA GGGTGGCTGA TGTTTCTCCG AGGGAGATAC GCAATGCAAT TGAGCCCGAG TACCTCCCTC AAACTCTGGA AGCATACAGT CTAGCAATTA CACAGGTGTT TTATGCCGGC ACTGCGCTAT GCACCCTAGC ACTGTTTGGG GTGCTGCCGA TCAAGTGCCT GTCCGTCAAG GGATCGAGAA TCCCGCCCAT GGCGCATGCT TGA
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Protein sequence | MQSSLLGRMT GVTGSRSKRH TKFRLRRLQQ PPTESTTRLA SPDDAQPIEE TKSQEHLEQS ATQGLSEASG DNNAGGAHPT PAPNEGDAPT VAELQHGSND RVDDGTSGSG TVSGWKLAAV LIGLSLAVFC MSLDSTVLST AIPKITAEFN SLHDMAWYVS AYNLTISSFS LVYGKIYSLY RVKWVYLTTL FLFEAGSLVC GAAPSSLALI IGRAIAGVGG AGVFLGSMLI VHEIMPLHQV PLFIALISGL YGIASVVGPL LGGVFTDYVS WRWCFYINLP IGGLTAFIIV LFVRPRVREK ATVKKTPWAQ LLDLDPLGII LILPAVMCML LVLQWGGAKY AWSNWRIIVL LVMAGSLALT FTAVQLWQGE RATIPPRIVR NRSVWGAIAF SVCIYGSFTV FTYYLPIWFQ AIKSVSATRS GVMNLPMILG VVVCSMLSGW GVSRVGYYVP FMYMAPVVGS IGAGLLTTLH VFSGPAAWIT YQLLLGVGIG SGMALPLVAV QTALPTDDVS TGSAIITFTQ SLSGALFNFV AQSVFQSRLV HNLNAALPGV DTARVADVSP REIRNAIEPE YLPQTLEAYS LAITQVFYAG TALCTLALFG VLPIKCLSVK GSRIPPMAHA
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