Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_08276 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001302 |
Strand | + |
Start bp | 1352528 |
End bp | 1355128 |
Gene Length | 2601 bp |
Protein Length | 720 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | RNA binding protein Nrd1, putative (AFU_orthologue; AFUA_5G04240) |
Protein accession | CBF74261 |
Protein GI | 259481067 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCG CAGTAGCAGA ACTGGACAAC TATCTCCAGT CTATGCTGGC TCTCAAGGCC CCGGGTGTCT CAGGATCTAA GATCAACAGT ATAACTTCGT TATGCACGGC CAATGTGCAG GTACTTCTCT CAATTTCTGA GCTCTGTGTG TGAACCGACG AGCTAACCTG TTCTTCTCTC TCTCAGAACG AATCCGTCCT TATCCAGAAA ATCTACACGC ATTTCAAGAA GGCACCAGGC ACACACAAGT TGGGCGTACT CTATGTCGTA GACTCAGTAA CTCGACAATG GTTAGATGCA GCGCGCAAAG CAGGACAGCC CTCCGGTAGT GCTGCTCCTG ACGGGACTTT TGCCGCTGGT GTTAACAGAG TGACCGAGTT ATTACCTGTG TTGATGACCG ATATCATAAA CAATGCGCCA GAAGATCAAA AGGTACGCTC TAGATGCATA CGTGCAAAAT ATCCATTCCC ACCGGATTGC GGGCATATAC ATAAGGCCGA TAAGACGCGA CGATTTATTT TCTCTCGCGC TGCCGATTAT AAGACTTTGA TCTACGTATA TCCCGCAATA CATCCCCTTA ACCTGCATAG AAACCGCGCC TTCTAGCGAT TCTCCTTCGT TTGGTAACGA ATAGTTTAAC TTACGTATTG CGTCCGTCTT CATAGGAAAA AATCAAGAAG CTGGTCGACA TTTGGGAGCG TGGATACACT TTTCCCGCCC CTATGCTCGC ATCCTTCAAG CAGAAACTGA ATGCGCCTGC GTCCAACAGT AAGCGGCTAC CTCCCTTTCA AACTGCAGTT GCTTGTATAT CAAATTCGTT GATCGCGAGT GATCGCGGGA AAACATGCCG AACTTGTCTA GGCTTGATAA ACGTGAGGCG AATTAGTTCT AATCCTGCTT ATAATAGATG TTGAATCGAC GACTCCTGAA GGCTCTCCAG CCCCGAACCA AGCCTTATTT GGAGGCACGC AACAGCAATC GTCAGTAGGA GCCAATGGTG CAGCATCCGC TACCCCAGCT CAGTCAGCGC CAGACACCTC GAGTATTCTG AAAGCCTTGG CGGATATGGC AAAGCAGAAC ACCGCAGCCC CGGCGGCTCC AGCTGCTGCT GCTCCCGTCA ATCCTCTGAG CGCATTAAGC CAGCAGGCCA CAGTTCCCCA GCCCGCGTCT TCATCCGTAG ACCAGGCTTT GCAGTCCCAG GTTAGCTCAG CTGGCGTAAA CCCCTACGCA GCTGTTGCAA ATCCGTTCGC TGCTTTAGGC AACTTAGCTC AAAACCCAGC TTTGGTCCAG CCGCAAAGTC AAAGCCATAC GCCGACACCA TTAACGGTTC CTCAGAATCC CTTAGCGGCG CTTCTACCGC AGGCGACTGC ACCGCCAGCG CAACCGCCCA CCATGACGCC TGATGCACTG CAGCAACAGC TTCAACTCCT CCAAATGTTG GCTGCCCAGG GTATCCCCCA GGAGCAGTGG GCTACGGCTT TACAGATCCT TACTCTCTCT AACCCTGCCG CCATGTCAAA TCTCAATCCC GGCCAAGCTC CAGGGTTCAA TCTCCCTGGC CAAAATTCCA ATGCCTGGGG TGGCCTTCCT GAACAGCCAC GTGATTTCGG GGACCGCGAG CGGGATCGTG ATTACATGCG TTCTCCTCCT GGCGGATATC GTCGTCGCTC CCGTTCCCCT GGCTGGGACA GACGCCGCGA TGTGTCTCCC CCACGCCGAC GTGATAGCCC TGTCTATGGA GAGTACCATG GTGATTCTCC TGGCCGTAGG GGGGCCGATC CGCGTGGTCG ACGAGGCAAC GACTACCGTC AACGCAGTCC GGTTGGACGT AGACGCCGTT CTCCTTCTCC TGCACGCAAG GACCCCACAC TTCCTCCACC GGGTCCTAAA TTCATTGAAT GGGACTACTC CATTGGCCAA GGAAATATCA AAGTCCTTAG CCGTACCCTC TTCGTCGGTG GCGTAACATC ATCTGAAGCC CATTTACGGT CTCTTTTCTC AAAGTACGGC GTAGTCCAGA CCTGCATCGT GAATGTCGAC AAACGTCATG CTTTTATCAA GATGATCAGC CGACAGGACG CCATCAATGC TCGAGAAGGA ATGGAATCAT ACAAGACCGG AGATATGCAG CTTCGGACAC GCTGGGGTGT TGGCTTTGGT CCCCGTGACT GCAGTGACTA TCAAACAGGA ATTAGTGTCA TTCCCATTGA GAGACTGACG GAGGCGGACC GGAAGTGGAT GCTCACTGCG GAGTACGGTG GTACCGGAGG AAGACCTATT GAGTCGGGCA TGATCGTTGA GGAGCCAGAC ATCGAAATTG GTGCGGGTGT GTCATCAAAG GCCATCAGTA GACGGATCGC AACCGACACT GGAGGCAAGC GTGGCCCGGT TTCAACACGC GTCCAGCATG ACCGGCCTCC CCGGCGTGAG CGTGACGGAC CCCAGATGGG CGACACGTCA AACGCCAACA ACGTGGGTGT ACCCCCAGCC GTTCCTGGTT TTGGTTTTTC CTTCCCCGGT ATGCCACTGT TTCCTCCTGG CTTCATGATG GGGGGTGCGC AGCCCAGTAA CCCATCCCAA CCTCCACCTC CTGGTCAGTG A
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Protein sequence | MSSAVAELDN YLQSMLALKA PGVSGSKINS ITSLCTANVQ NESVLIQKIY THFKKAPGTH KLGVLYVVDS VTRQWLDAAR KAGQPSGSAA PDGTFAAGVN RVTELLPVLM TDIINNAPED QKEKIKKLVD IWERGYTFPA PMLASFKQKL NAPASNNVES TTPEGSPAPN QALFGGTQQQ SSVGANGAAS ATPAQSAPDT SSILKALADM AKQNTAAPAA PAAAAPVNPL SALSQQATVP QPASSSVDQA LQSQVSSAGV NPYAAVANPF AALGNLAQNP ALVQPQSQSH TPTPLTVPQN PLAALLPQAT APPAQPPTMT PDALQQQLQL LQMLAAQGIP QEQWATALQI LTLSNPAAMS NLNPGQAPGF NLPGQNSNAW GGLPEQPRDF GDRERDRDYM RSPPGGYRRR SRSPGWDRRR DVSPPRRRDS PVYGEYHGDS PGRRGADPRG RRGNDYRQRS PVGRRRRSPS PARKDPTLPP PGPKFIEWDY SIGQGNIKVL SRTLFVGGVT SSEAHLRSLF SKYGVVQTCI VNVDKRHAFI KMISRQDAIN AREGMESYKT GDMQLRTRWG VGFGPRDCSD YQTGISVIPI ERLTEADRKW MLTAEYGGTG GRPIESGMIV EEPDIEIGAG VSSKAISRRI ATDTGGKRGP VSTRVQHDRP PRRERDGPQM GDTSNANNVG VPPAVPGFGF SFPGMPLFPP GFMMGGAQPS NPSQPPPPGQ
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