| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_08095 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001302 |
|---|
| Strand | - |
|---|
| Start bp | 730517 |
|---|
| End bp | 732410 |
|---|
| Gene Length | 1894 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | MFS toxin efflux pump (AflT), putative (AFU_orthologue; AFUA_1G12620) |
|---|
| Protein accession | CBF73873 |
|---|
| Protein GI | 259480854 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00148493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.123632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CAAGTCTTCA ACAAGTATAA TGGATATTGA AAAGCACCCC GACGAGAAGG CCGCCGATGC
TGCAGCCGAT GAGCCCGAGT ATCCCGGCTT CGCTAAAGTT GCCGTGATCA TCCTTGGGTT
ATACCTGTCT GTCTTTCTCG TCGCCCTCGA CCAAACGATC ATAGGGGTAG CCATTCCCGA
AATCACGAAC CAATTCAAGA GCATTGAGGA TATTGCGTGG TATGGCAGTG CATATTTTCT
CACTTCCACA GCACTGCAAC CGTCGTATGG CCGGCTCTAT AAGATATTCA GTGTTTGTTC
TCCCTCACCC TCTTTCACCC CCTTGGAGAG GCACATGGGC TGCTTAGTCT GACAGCTATA
GGCAAAATGG GCGTTTCTGT GCGCCGTCTT TCTCTTTGAG CTGGGGTCCT TGATATGCGC
CGTCGCACCA TCGAGTACCG TCCTTATCGT CGGACGGGCC GTTGCTGGTA TAGGCGTCGC
GGGTATTTTC TCTGGTGCGC TGGTCATCAT TGCACTATGT GGTGGGTTGC TTTAGACCAT
CCCGTTTACT GCTGAATCCT CTGACCTGAA TAGTACCCCT ACCTAAACGC CCGCTCGTCT
TCGGTATGTT CGGCATGGTT TGGGGCATCG CATCCATTGC CGGACCGCTG TTGGGCGGCG
CCTTCACTGA CTCTGTCTCC TGGAGGTGGT GCTTCTACAT CAAGTATGTC GCTCGACCAC
GGCATTCAAC CATTATTCAC TGACACTTGA CCTTTACTAG CCTGCCCATC GGCGGTGTCT
CGATGGCTAT AGTAGCCTTT ATCCTGCAGC TCCCTGAGCA AAACCTATCC AGCAAAGCCA
CTCCACTCCT CGACCGCATC AAGCAAATCG ACTTCATCGG CGCTGCCTTG CTGATCCCCT
GCATCATCTG CCTTCTGCTC GCACTGCAAT GGGGCGGAAA CAAATACGCG TGGAGCAACG
GTCGCATAAT AGGGCTCTTC GTCACCTTCG GCGTCCTCGC GATCCTAACC ATATTCTCTC
AAATCAAACT CGGTGACCGC GCAACTCTCC CACCGCGGAT CATGACCCAG CGCACTGTCA
TCACATCAAC GATCTACGCC CTCCTCTTCG GCGGCTCTTT CTTTGTGCTT GTTTACTACC
TCCCGATCTT CTTCCAGAGC GTCCGCGGCT CCTCAGCCAT GACATCGGGC ATTCAGCTCC
TCCCGCTCAT GCTAGCAACC GTGGTCTCGT CCGTGCTAAC TGGCATTCTT GTTACGATCT
TCGGCTACTA TACGCCTTTT CTGATTGCTA GTACAGCCAT TGCCTCCATC GGTGGAGGCC
TAATAACGCT CTACTCGATT GACATCTCCT CGGGGAAGTG GATTGGGTAC CAGATCCTCC
TTGGAGCCGG GGTCGGCGCA GGGTTCCAAG TCCCAATGAC GGCCGTTCAG ACCTCGCTTG
CCTCCAAGCC CGACGATATC CCGCAGGGTA CAGCGGCCGT GATGTTCTTT CAGACGTTGG
GCGGCGCACT ATTCATTGCG GTTGCGCAGT CGCTTTTCCA GAACGGGCTT ATTGAAGGGG
TAGTCGAGTA TGCACCGTCT GTGGATCCAG CGGCAATCGT TGAAGCGGGC GCTACGGAGA
TGAGACATGT ACTTGAGCAG TTGGGGCAAC TCGATCAGTT GGAGAATGTG ATATTGGCGT
TCTTAGACGG ATTGAGGGAC ACCTATCGGC TCAGTTTGGC GTTGTTTCTG GCGGCTTTTG
TCGTATCTTG TTTCTTTGAG TGGAGAAGTG TCAAGGAAGG GGGGAAAAGT GCAGAGGGAG
CGGTGCCAGC TTTATAGATG GACAGAATGG TAGACCGAGT TGGGGGTGGC AAATTGTTTA
CAGGATTATA GATTCACATG CTGTATTTAG CGAT
|
|---|
| Protein sequence | MDIEKHPDEK AADAAADEPE YPGFAKVAVI ILGLYLSVFL VALDQTIIGV AIPEITNQFK
SIEDIAWYGS AYFLTSTALQ PSYGRLYKIF SAKWAFLCAV FLFELGSLIC AVAPSSTVLI
VGRAVAGIGV AGIFSGALVI IALCVPLPKR PLVFGMFGMV WGIASIAGPL LGGAFTDSVS
WRWCFYINLP IGGVSMAIVA FILQLPEQNL SSKATPLLDR IKQIDFIGAA LLIPCIICLL
LALQWGGNKY AWSNGRIIGL FVTFGVLAIL TIFSQIKLGD RATLPPRIMT QRTVITSTIY
ALLFGGSFFV LVYYLPIFFQ SVRGSSAMTS GIQLLPLMLA TVVSSVLTGI LVTIFGYYTP
FLIASTAIAS IGGGLITLYS IDISSGKWIG YQILLGAGVG AGFQVPMTAV QTSLASKPDD
IPQGTAAVMF FQTLGGALFI AVAQSLFQNG LIEGVVEYAP SVDPAAIVEA GATEMRHVLE
QLGQLDQLEN VILAFLDGLR DTYRLSLALF LAAFVVSCFF EWRSVKEGGK SAEGAVPAL
|
|---|
| |