| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_05452 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001305 |
|---|
| Strand | - |
|---|
| Start bp | 2512308 |
|---|
| End bp | 2516632 |
|---|
| Gene Length | 4325 bp |
|---|
| Protein Length | 1209 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Pre-mRNA-splicing factor rse1 [Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] |
|---|
| Protein accession | CBF81885 |
|---|
| Protein GI | 259485100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.744931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GCTCTCTACC TTACCTCTCC TCACGAGGAT ACCTCGTGTT CGAGTGTTCT CCAACTTGCT
GTCTCTCTCT GCAGCAATGG GAGTACTTTT ATTATAAAGA CACCCAATAT TGGCCGCAAG
TACATCGTAA ACACACCTCG GTTCCCGGTT CGGTCGAGCC TCGACGACCT AGTCGCCCAT
CATGGCTACC ACTTCGCATA TGTTTATGTA CTCCCTGACA ATCCAGCCGC CAACCGCGAT
TACACAGGCT ATTTTGGGCC AGTTTGCGGG AACGAAAGAG CAGCAGATTG TCACCGCGTC
CGGGTCGAAG CTGACTATTC ACCGACCCGA TCCTACCCAG GGCAAGGTCA TTCCGCTATA
CACTCAAGAT GTCTTTGGCA TCATCCGAAC ACTGGCTGCT TTCAGGCTAG CTGGTAGTAA
CAAAGGTATG TTTTTACGTT CCCATCTCAG CGAAAATTCC AAGATCATTT TAGTGATTCG
TCAAGCTTCT CGGGCAACAT GATCCTTCAC TGCCGAACGA GTTCCCTTGA AGGCGGGACG
TGGCCCGGTC GATGAAGTGG ACGCTCGTGG CTCGAACAGT GCTGAGATCT GCTTATAGAT
TACATAATTA TTGGGTCGGA CTCGGGACGC ATCACCATCA TTGAGTATGT ACCCTCACAG
AATCGATTCA ACCGGATTCA TCTTGAGACG TTCGGCAAGT CGGGCGTGCG TCGCGTCGTT
CCTGGCCAGT ATTTGGCGGT CGATCCTAAG GGTAGAGCAT GTCTCATTGC GTCGGTGGAG
AAGAACAAGC TTGTTTATGT TCTGAATCGA AACTCGCAGG CCGAGCTTAC GATCTCATCT
CCGCTGGAAG CGCACAAGCC ACAGACTTTG GTGTACTCAG TAGTTGCACT AGATGCTGGG
TATGAGAACC CCGTCTTTGC TGCCCTTGAA GTGGACTATT CCGAGTCTGA CCAGGATCCG
ACGGGTCGGG CATACGAAGA AGTTGAAAAA CTTCTAGTAT ATTATGAGCT CGATCTTGGC
CTCAACCATG TTGTCCGAAA ATGGACTGAT CCTGTCGACC GCACATCATC GATGCTCTTT
CAGGTGCCTG GTGGAGCCGA TGGCCCGAGC GGTGTTCTTG TATGTGCGGA AGATAATATC
ACCTATCGAC ACTCGAACCA AGATGCTTTC AGGGTACCTA TACCGCGTCG CAAAGGCGCA
ATGGAAAATC CTGAGCGCAA GCGTTGCATT ACAGCTGGTG TAATGCATAA GATGCGTGGG
GCTTTCTTCT TCCTCTTACA GACCGAGGAT GGTGACCTTT TTAAGCTCAC GCTTGACATG
GTTGAGGATG ACAAAGGCCA ACTCACGGGG GAAGTGAAAG GATTGAAAAT TAAGTATTTC
GATACAGTAC CCCTGGCTTC GAGCCTGCTC ATCCTAAAGA GTGGATTTCT CTATGTTGCC
GCCGAAGGTG GAAATCATCA CTTTTATCAG TTCGAAAAAC TTGGCGATGA CGACGAGGAG
ACTGAGTTCA ACAGTGATGA CTTCTCAGCA GACCCGGCAG CCCCCTGTAC ACCTGTCTAT
TTCCAGCCTA GGGGTGCTGA AAATCTGAAT CTCGTGGAGG CTATAAACTC TCTCAACCCA
CTGGTTGATA GCAAGGTTGT GAATATCTCC GAGGATGATG CTCCCCAGAT TTTTACAGTT
TCTGGCACAG GTGCTCGAAG CACTTTCCGG ACGTTAAAAC ATGGTTTGGA GGTCTCTGAG
ATAGTGGAGT CCGAGCTTCC TAGCGTACCA TCAGCTGTTT GGACGACAAA GCTTACCAGG
GCGGATGAAT TCGATGCGTA CATTGTACTG TCCTTCGCAA ACGGCACTCT CGTTCTTAGC
ATCGGTGAAA CTGTAGAAGA AGTGACTGAT ACCGGGTTCC TTTCGTCAGC GCCCACCCTG
GCTGTTCAGC AGCTTGGCGA GGATTCCCTT ATTCAAATTC ATCCTCGAGG CATTCGCCAT
ATTCTCGCAG ATCGAAGAGT GAACGAATGG CCTGCGCCGC AACACCGCTC TATCGTGGCC
GCCGCGACAA ATGAGCGCCA GGTTGCGGTT GCGCTCAGCT CAGGTGAGAT AGTGTACTTC
GAGCTGGACG CTGACGGGTC ACTCGCTGAG TATGATGAAC GACGCCAAAT GTCTGGAACT
GTAACGTGTC TCAGTCTGGG CGAGGTACCA GAAGGTCGCG TCCGAAGCTC ATTCCTGGCT
GTCGGTTGTG ACGATTCGAC AGTCCGCATC CTCAGCTTGG ACCCGGATAC GACGTTAGAA
AACAAGTCTG TTCAAGCGTT GACTGCTGCA CCATCCGCTC TGAACATTAT TGCCATGGCT
GACTCTAGCT CTGGCGGGAC CACTTTGTAT CTTCATATCG GTCTTCACTC AGGCGTCTAT
CTTCGAACGG CGCTTGACGA AGTGACCGGC GAATTATCCG ACACACGCAC TCGGTTCCTG
GGATCTAAAG CCGTCAAACT CTTCCAGGTC TCAGTGACAG GCCAGACAGC CGTGCTTGCC
CTGAGCTCGC GTCCTTGGCT TGGCTACTCC GATACCCAAA CAAAAGGCTT TATGCTTACG
CCGCTGGACT ATGTTGGACT CGAGTGGGGG TGGAACTTTT CGAGCGAGCA GTGCGTCGAG
GGTATGGTGG GTATTCAAGG GCAGAACCTA AGGTATGTGC ATGCACCCCT GTTTCTACTA
TTGTTTCTAT GCTGGATCAT ATGATGAGAA CGGAATCATC CCTGAAAGAC CATGTGGATT
ATCATTCTTT TATTTATACT CCAATTGTTC CTACTGAGAT CGCAATTACC ATCCATAATG
CGTTATGAAA CACGATGTGT GACTTTCGCT GACGTTGGGT GACTAGAATC TTCTCGATTG
AGAAACTGGA CAACAACATG CTGCAACAAT CCATACCTCT GGCATATACG CCACGCCACT
TCATCAAACA TCCAGAAGAG CCCTTGTTTT ATGTTATCGA GGCCGACAAT AACGTTCTGT
CGCCAGCAAC ACGGGCCCGG TTGCTTGAAG ACTCAAAGGC TCGCGGCGGC GATACAACGG
TCCTTCCTCC GGAAGATTTT GGATATCCTC GCGGTACAGG CCATTGGGCT TCTTGCATTC
AAATAATCGA CCCATTAGAT GCGAAGGCGG TGGTTGGAGC AGTCGAGCTC GAAGAGAATG
AAGCAGCTGT GAGCATTGCT GCTGTTCCGT TCACTAGTCA GGATGACGAA ACATTCTTGG
TCGTGGGAAC TGCCAAAGAC ATGACTGTCA ACCCGCCTTC CTCAGCGGGA GGGTACATTC
ATATCTATCG GTTCCAAGAG GACGGAAAGG AGCTGGAATT CATCCACAAG ACGAAAGTCG
AGGAGCCTCC TCTGGCACTT CTTGGATTCC AAGGTCGTCT ATTGGCTGGT GTTGGATCTG
TGCTTCGAAT CTACGATCTT GGAATGAAGC AGCTGCTCCG AAAGTGCCAG GCTGCTGTTG
CTCCAAAGGC TATCGTTGGC CTTCAAACCC AAGGCAGCCG AATTGTGGTT AGCGACGTCC
GTGAAAGTGT CACGTACGTT GTCTACAAAT ATCAAGATAA CGTTTTAATT CCGTTTGTGG
ATGATTCCAT TGCCCGCTGG ACTACGGCAG CGACGATGGT GGATTACGAG ACAACGGCCG
GGGGTGACAA GTTTGGTAAC CTCTGGTTGG TGCGATGCCC AAAGAAGGCC TCTGAGGAGG
CAGACGAGGA AGGCTCAGGC GCTCATCTGA TCCACGACCG CGGATATCTT CAAGGAACGC
CGAACCGGTT GGAGCTGATG ATCCATGTAT TCACCCAAGA CATTCCGACC AGTCTACATA
AAACCCAGCT GGTAGCTGGT GGTCGTGATA TCCTAGTGTG GACAGGATTT CAAGGCACAA
TTGGCATACT TGTGCCATTT GTTAGTCGTG AAGATGTCGA CTTTTTCCAG AGTTTGGAAA
TGCAACTGGC ATCGCAATGC CCGCCGCTTG CCGGGCGTGA TCACCTCATC TACCGGAGCT
ACTACGCGCC GGTGAAGGGA GTTATTGACG GGGACCTGTG CGAACAGTAC TTCCTCCTGT
CGAACGATAC GAAGATGATG ATTGCTGCGG AATTGGATCG CTCAGTCAGG GAGATTGAGC
GAAAGATCTC GGTATGTACA TCTTGTCTTT CTGCCTTTCT TGACACCTTT TCAGATGCTA
ATTTCGCGCA GGATATGCGA ACAAGAGTGG CGTACTGATT TAGCGAATAT GGCGTTGGCG
GGCGCTGGTC CACCGATAAT ATTGCCTTTC TACTCTATTC AATCTAATTA TTACCTTCAC
TCCTC
|
|---|
| Protein sequence | MATTSHMFMY SLTIQPPTAI TQAILGQFAG TKEQQIVTAS GSKLTIHRPD PTQGKVIPLY
TQDVFGIIRT LAAFRLAGSN KDYIIIGSDS GRITIIEYVP SQNRFNRIHL ETFGKSGVRR
VVPGQYLAVD PKGRACLIAS VEKNKLVYVL NRNSQAELTI SSPLEAHKPQ TLVYSVVALD
AGYENPVFAA LEVDYSESDQ DPTGRAYEEV EKLLVYYELD LGLNHVVRKW TDPVDRTSSM
LFQVPGGADG PSGVLVCAED NITYRHSNQD AFRVPIPRRK GAMENPERKR CITAGVMHKM
RGAFFFLLQT EDGDLFKLTL DMVEDDKGQL TGEVKGLKIK YFDTVPLASS LLILKSGFLY
VAAEGGNHHF YQFEKLGDDD EETEFNSDDF SADPAAPCTP VYFQPRGAEN LNLVEAINSL
NPLVDSKVVN ISEDDAPQIF TVSGTGARST FRTLKHGLEV SEIVESELPS VPSAVWTTKL
TRADEFDAYI VLSFANGTLV LSIGETVEEV TDTGFLSSAP TLAVQQLGED SLIQIHPRGI
RHILADRRVN EWPAPQHRSI VAAATNERQV AVALSSGEIV YFELDADGSL AEYDERRQMS
GTVTCLSLGE VPEGRVRSSF LAVGCDDSTV RILSLDPDTT LENKSVQALT AAPSALNIIA
MADSSSGGTT LYLHIGLHSG VYLRTALDEV TGELSDTRTR FLGSKAVKLF QVSVTGQTAV
LALSSRPWLG YSDTQTKGFM LTPLDYVGLE WGWNFSSEQC VEGMVGIQGQ NLRIFSIEKL
DNNMLQQSIP LAYTPRHFIK HPEEPLFYVI EADNNVLSPA TRARLLEDSK ARGGDTTVLP
PEDFGYPRGT GHWASCIQII DPLDAKAVVG AVELEENEAA VSIAAVPFTS QDDETFLVVG
TAKDMTVNPP SSAGGYIHIY RFQEDGKELE FIHKTKVEEP PLALLGFQGR LLAGVGSVLR
IYDLGMKQLL RKCQAAVAPK AIVGLQTQGS RIVVSDVRES VTYVVYKYQD NVLIPFVDDS
IARWTTAATM VDYETTAGGD KFGNLWLVRC PKKASEEADE EGSGAHLIHD RGYLQGTPNR
LELMIHVFTQ DIPTSLHKTQ LVAGGRDILV WTGFQGTIGI LVPFVSREDV DFFQSLEMQL
ASQCPPLAGR DHLIYRSYYA PVKGVIDGDL CEQYFLLSND TKMMIAAELD RSVREIERKI
SDMRTRVAY
|
|---|
| |