Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_04923 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001303 |
Strand | + |
Start bp | 541181 |
End bp | 542997 |
Gene Length | 1817 bp |
Protein Length | 459 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | hydroxymethylglutaryl-CoA synthase, expressed (Eurofung) |
Protein accession | CBF76472 |
Protein GI | 259482209 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000140052 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.183137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GCCCACGTTT AACCCCTGGG GCCTTTCCTT AGAATCAATT AATACTCTTC CCATTCTTTC TCAACCTTGC CTCCCTCCTT CTTATCCTCA TCTTTTTTAC TCCATTGTGG TAGCTCTTTG CCATCTTCCC ACGCGACTAG ATTCCCAACT TCCCCTCCCG ACACCGCCAA TATGTCTCGC CCGCAGAACA TCGGTATCAA GGCCATCGAG GTCTACTTCC CCAGCCAGTG TCTCGACCAG ACGGAGCTCG AGAAGCACGA TGGCGTTAGT GAGGGAAAGT ACACAATCGG TCTTGGACAG TCCAAGATGA GCTTCTGTGA TGACCGTGAG GGTACGTTTG GATTCTGCCA ATAAAAAAAT TTGGCTGAGC CTAACTTGCT GCTGTGTAGA TATTTACTCT ATTGCTCTCA CCACCCTTTC CTCCCTCATG AAGAAATACA ACATTGACCC CAACTCCGTC GGTCGATTGG AAGTCGGTAC TGAGACTCTG CTGGACAAGT CCAAGTCCGT CAAGTCCGTC CTCATGCAGC TTTTTGCCCC CCACGGAAAC ACCAACATCG AGGGTGTCGA CACCGTCAAT GCTTGCTACG GAGGAACCAA CGCTCTGTTC AACAGCATCA ACTGGGTGGA GTCGTCTGCC TGGGACGGCA GAGACGCCGT CGTCGTTTGT GGTGACATTG CTCTTTATGC CAAGGGCGCC GCTCGGCCCA CTGGTGGTGC CGGCTGTGTG GCCATGCTGA TCGGTCCCGA CGCTCCTATC ATCTTTGAGC CCGGTCTCCG TGCTTCTTAC CTTACCCACG CATACGACTT TTACAAGCCC GATCTCACTA GCGAGTACCC CGTTGTTGAC GGCCACTTCT CCCTTCGTTG CTACACCGAG GCCGTTGATG CCTGCTACAA GGCCTACGGT GCCCGTGAGA AGACACTGAA GGAGAAGACC CAAAATGGCA CCAACGGTGT CACTCACGAC GAGTCTAAGA CCGCTCTCGA CCGTTTCGAC TATGTCCTCT TCCACGCCCC TACTTGCAAG CTCGTGCAGA AGTCCTACGC TCGCATGCTC TACAACGACT ACCTCGCCAA CCCCACTCAC CCCTCATTCG CTGAAGTTGC CCCTGAGCTG CGTGACCTCG ACTACGAAAC CTCTCTGACT GACAAGAATG TCGAGAAGAC TTTCATGGGT CTGACCAAGA AGCGTTTCGC CGAGCGCGTG CGCCCTGGTC TTGACGTTGC CACCCTGTGC GGTAACATGT ACACCGCTAC CGTCTACGCT GGTCTCTGCT CTCTGCTCAG CAATGTCACC TTCGACCCCA GCCAGCCCAA GCGCCTCGGC TTCTTCTCCT ACGGCAGTGG TCTTGCCAGC TCTCTGTTCA GCGCCAAGAT TGTTGGCGAC GTTTCCTACA TTGTTGAGAA GCTGAACCTG CACAAGCGTC TTGAGTCCCG CACAGTCTTG TCTCCCACGG ACTATGAAGC CATGTGCGAG CTCCGCGAGC ACGCCCACTT GGCCAAGGAC TTCAAGCCCT CTGGCAACCC CGACACACTC TTCCCCGGCA CATACTACCT CACCGAGATT GATGGTATGT TCCGTCGCAA GTACGAAACA AAGGCATGAA TGACGACCAG CATATAATCA CCATTGCTTC TAATCATCCT CCTACGATGA GGATTCTGTC TATATGACTT CTAGATTCCC TCTTGCATGA TGTTGTTATA CTCGGTACGA TAGAATCGTT CTGTTTCTTT TTTTCTGGGC AAGGCGGCGC TGGAAAGCTT CCGGTTCATG AATACGAAAA ACTTGTTTTT GAAATATCAT AATACTG
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Protein sequence | MSRPQNIGIK AIEVYFPSQC LDQTELEKHD GVSEGKYTIG LGQSKMSFCD DREDIYSIAL TTLSSLMKKY NIDPNSVGRL EVGTETLLDK SKSVKSVLMQ LFAPHGNTNI EGVDTVNACY GGTNALFNSI NWVESSAWDG RDAVVVCGDI ALYAKGAARP TGGAGCVAML IGPDAPIIFE PGLRASYLTH AYDFYKPDLT SEYPVVDGHF SLRCYTEAVD ACYKAYGARE KTLKEKTQNG TNGVTHDESK TALDRFDYVL FHAPTCKLVQ KSYARMLYND YLANPTHPSF AEVAPELRDL DYETSLTDKN VEKTFMGLTK KRFAERVRPG LDVATLCGNM YTATVYAGLC SLLSNVTFDP SQPKRLGFFS YGSGLASSLF SAKIVGDVSY IVEKLNLHKR LESRTVLSPT DYEAMCELRE HAHLAKDFKP SGNPDTLFPG TYYLTEIDGM FRRKYETKA
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