| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_02296 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001307 |
|---|
| Strand | + |
|---|
| Start bp | 3417976 |
|---|
| End bp | 3420937 |
|---|
| Gene Length | 2962 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | DNA damage and replication checkpoint protein Rfx1, putative (AFU_orthologue; AFUA_5G06120) |
|---|
| Protein accession | CBF86555 |
|---|
| Protein GI | 259487690 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00552688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTCGGCTCTG AAGGAAAGAT CAAAACAGAC GGGCACTATT GAACCTATTA TTATCAACGC
CCGTGGTTAC CCACTGTTTC GCACCTAGCA ACGAGAGAAC CCCAAGCAAC AGCACTATTC
AAGGTCCTTT GTGCGAATAG CTCCTGTAAA AGGAAGATGC CTCCTGAGCT TGGTAAGGCG
CTGCATTTCC CTGCAGGATA CCTCTTCCGT TCCCCTTCAT CTGATGCTTA ACGGACTGGA
AGTGGTTTTT ACTTACCGCA TCGCTGACCC GTGGTGACAC CAGCTCGCGC AGCCTCCCTG
TCCTCCAGTG CAGCCTCTCA ATCAACCCAA GTCGTCGCTC CTCAGAGTCG TCCTGGCACG
GCAGATCTCA TGAGATCGCG CTCAGAAACA GTAATATCTA GGAATAGCCG TCGCCCGCGG
TCGAGAGGCT CAACTGCTAG TATTCATTCG ACCACAACTC AGCAGACCCA AGATCAGCAA
CTCACCGATG GCTTCCCCCA GTTTCTGCCG GCCCAAACAT CTGCCGGATC CAATGTTTTC
GGCAACAACC CGGAGGATAT TATTATGCGA TTTGGCCAGC AATTGTCGCA CCAAGTGAAC
GGCACCGCCT TGGATTCTTT ACAAGACGCC CACCACTCTG CAATTTCGAG GGCTGACGAG
TTCCCCAATC ATGCTGTTCA TGGTCATCAT CTTTCCCACC ACTCATTACC CTCAGGAGTC
TCACACGGGA TGCCAGGCGT GCCAATACCT CAGTATCAAA ACATATACGA CAGTGGAATT
GAGAACCACA TACAGGAGCA CGTTCTGGAT GAACATGATG CTTCGGAAGC CGGCCTCAAG
AAAAAAAAGG GATCAAGCTC CTCCCTAGCC AACGATAATG AGTTGCGAAA ACTCTTGCGG
CAGTATGAGG GTTATACACT GAAGCAAATG GCGGCAGAAG TACTCAAGCA TGAGGGAGCT
GGCGGAAAGG CAGAAAAGGT CAAACAAGTC TTCGCAATGA TCTGGTAAGT ACCAATAACA
TAATCATGCT CCCATTTGCT GAATCTTATA CGCCATAGGT TGAAGGAGAA CTGCAGAAAA
AGCACAGGCT CTGTCCGCAG AGATCGTGTT TACTGCTGTT ATGCCGAAAA GTGTGGAACC
GAACGTGTCT CCGTGCTGAA TCCTGCGTCT TTCGGGAAAC TAGTTCGAAT CATATTTCCA
AATGTACAGA CGCGCAGATT AGGCGTTAGG GGGGAGTCAA AGTATCACTA CGTTGATTTA
ACGGTAATCG AGGAAAAGCA ACAGAAGCCA TCCACATCGA CCACCCAGAA CCCTTCCCGC
GACTCCACGG CAGTAGGTGG TGTGGATGCT ATGAATGGCA ATGACATGCA AAGAGCGTGA
GTGAATGTTT TAATTCGCAA GAAAACCACA GACTGACATC CCCCATAGTG CGAGCACCAT
ACAGCAGCCT ACAGCAGATA CAGCACTATT TCCATCTCCT ACTACTTCAT TCGCTCCCAG
GGCCTCCATC GACAGGGCAA TTTCAGGCTG CGGGTGCCAG GCCTCTTCAC AGGCCGAAGT
GATAACCCTC GAGAATGTTG CCAGTCATTC AGGAAAGTTA ATTTACCAGA TGTTACAACT
ACCTACGACG GATAGCTCCT CGGTTGATAC AGACTCTCTG CAACTACCGG ATATCAATTA
TTACCTCCCC GAAAACACGG ACTCTAAGGT AGCGGCGGCA CTCGCTGCAC TCTATCGTTC
ACACTGTATC TCAGTTATCG ATAGCTTCCG GTATTGCAAA GAACGCAACC TGCTCAGATT
CTTCTCTGCG TTCCATGGCA CTTTAACCGT TCCGGTCCAG AAGCTGCTGA CGCATCCTAA
TCTCGCACCT TGGATCAAAG AGTGCGATTG GCTTATGTAC CAGAAGATGA TTGCGTTTGT
GGCACCGTTG ACAACACAAG TTGTTCCGAA ACTTGTCCTG GATGCCTTTA GTTCAATATC
TCAACGACTT ACGACACATA TTGCCGAAAC ATTCAAGGCC CAACCTGTAC ATGTTTCCCT
CGCGAGGTTG CTGCCAGCTC ATATCTTCTG CAATCTCCTG AAGCACATGC TTGATGTGAA
TCAGTCTGCT AATGCTGCTG CGGCGTGGCT GTGCCACCCC GATAACAGGA ATCAGATGTG
GCTCGACTTC ACTACATTGG TTGACCCCAA AGAAATGATC ACCCGGGCGA ATATCCCCGT
CTGCGCGGAA CAGGCCACAG AACAAATACT GAAGGATGAT ATTCGCGCCC TGCTTACTCC
TGTCGCTGAT TTGAACCCTG CTGCCTCGCA CCCGTTCTTC TCTCAACCCG ATTTGGAAAA
GAGCCCCAAA CCACACAAAT TTTCCGTTGA GGAGTCCGTG GGTGATGAAT ACAATTTCCC
GGACAAATGG ATCTCCTTTA TACTAAACCT CGCTCATATT TTTCCTCAAC ACCGTACACA
GTGCATCATT GAACGAGTGG ATGCATTGTG GGATTGCATA CTACACCGCC TTACATTGGG
AGGTGCCCAG AGCTTCAGTG CCTGGTGGAT GACCAAGGTC TTTTTCCATG AGATGATGTT
ATGGCAGGCA GAGAAGGGTG GATTCATGCA TTACACACCA AGCACTTTGC AGAAAGCAGG
CCTGGACTCT GACCAGTCCG GCCCGGGAGG ACTCGTCCTC AGAAATTCCC CAAAAGTTGT
TGGTAACGAG TCATCTACGT CAAATGCGCA AGATGGCGCA TCATTGGAGA GGTCACGGAT
GGGAGTCGAA ACAAATCCCA GTCGCATGGA TGATGAAAAA CCTACTGATA TTTCCGAAAA
CTTAACGTCC TTTCACGCCC CTAATCACGA CGACAGTGCT ATTGATCTGG ACGACGACTC
AATGTTAATG ACAGTGGGAA AGTACGGTGA TATGATGGTC TCCGACCCCG CAGATGCTGA
AGGTGATGTT ATTGTCATTT AA
|
|---|
| Protein sequence | MPPELARAAS LSSSAASQST QVVAPQSRPG TADLMRSRSE TVISRNSRRP RSRGSTASIH
STTTQQTQDQ QLTDGFPQFL PAQTSAGSNV FGNNPEDIIM RFGQQLSHQV NGTALDSLQD
AHHSAISRAD EFPNHAVHGH HLSHHSLPSG VSHGMPGVPI PQYQNIYDSG IENHIQEHVL
DEHDASEAGL KKKKGSSSSL ANDNELRKLL RQYEGYTLKQ MAAEVLKHEG AGGKAEKVKQ
VFAMIWLKEN CRKSTGSVRR DRVYCCYAEK CGTERVSVLN PASFGKLVRI IFPNVQTRRL
GVRGESKYHY VDLTVIEEKQ QKPSTSTTQN PSRDSTAVGG VDAMNGNDMQ RAASTIQQPT
ADTALFPSPT TSFAPRASID RAISGCGCQA SSQAEVITLE NVASHSGKLI YQMLQLPTTD
SSSVDTDSLQ LPDINYYLPE NTDSKVAAAL AALYRSHCIS VIDSFRYCKE RNLLRFFSAF
HGTLTVPVQK LLTHPNLAPW IKECDWLMYQ KMIAFVAPLT TQVVPKLVLD AFSSISQRLT
THIAETFKAQ PVHVSLARLL PAHIFCNLLK HMLDVNQSAN AAAAWLCHPD NRNQMWLDFT
TLVDPKEMIT RANIPVCAEQ ATEQILKDDI RALLTPVADL NPAASHPFFS QPDLEKSPKP
HKFSVEESVG DEYNFPDKWI SFILNLAHIF PQHRTQCIIE RVDALWDCIL HRLTLGGAQS
FSAWWMTKVF FHEMMLWQAE KGGFMHYTPS TLQKAGLDSD QSGPGGLVLR NSPKVVGNES
STSNAQDGAS LERSRMGVET NPSRMDDEKP TDISENLTSF HAPNHDDSAI DLDDDSMLMT
VGKYGDMMVS DPADAEGDVI VI
|
|---|
| |