Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_00312 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001308 |
Strand | - |
Start bp | 3887399 |
End bp | 3889399 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | RNA polymerase I specific transcription initiation factor RRN3 superfamily (AFU_orthologue; AFUA_1G02590) |
Protein accession | CBF89746 |
Protein GI | 259489458 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.979251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.805202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGAAA TGGATCTATC CCTTTCCCCA TCTTCCTCTA TCGCCTCTGA TGCGGACGGA CAGCCCAGCC CACGAAAAAA GACCCGAGTA CAGTTCGATG AAGACGTGGA AATGCGGGAA ATCTCATACA ATGCTGAAAC ACAAGGAGGG AGTCAATGGA CAACGGATAA GAGCGCAGCC GTCGTGCGAG AGGAGGTACG GCGGGCGATT CAACGGCATG TTTCTGGAGG CGATAGCGAA GCCTACGACC GCGTCAAGGA GGTCTTTTCC ATCAACCCTC GGCGGCTGGA CGCGAACGGC ATGCCGCCAT CAAATGTACC TACACACACT ACACTGAAAC ATCATCTCAT GGGTCTATTG TCAAACGTGG CGGCCTTGGA TCGCAGCTGT AATGGGCTAG TTCAAGCCGT GTTGGACAGC GAGTGGCTCG GGCGCGACGA GTCGTACATC AAGCTATATA TTCGGTTTCT GGGAAACCTT GCAGCTGCGC AGGGAAGCTA TCTGGGTTCT GTACTTAAGA TGTTGGCAAA TTACATGGGC GAGCTTCCTA GGGGAACAGG GAGGCTACCG GGTTATCCGC ACGTCCATCC CGCTGAAGCT TACACCCGCG TTCATATGGC GATGCGCCAT GTCTTGCAGC TTGTTCCGTC TGGGAGTGGC TCTCTTTCGC AGATAATATC TTCCCAATTT CCGTTTGATA CGGATTCAGC AAAAGCGAAC ATCGCCTATA CGCAGAATCT CGTTAAAGTC ATCCGTTATG CTCCTGAACT CCAAGCCGAT ATTCTAGCTC TCATCACTGA AAAGCTGGTG AAGATCGACG TCCAAATCCA GGTTGATATG GAAGACTTGG AAGATGAGGA GGGCGAGGAA GTCCTGCACG CCATTTCTCC AGAGGCTGTG ATGTTTGCTG AGGACCTGGA CGATGAAGAT GACGATGACA ACGCTTCCGT CGTAAGCGAC GAGTCTGTTG AGCCGGAATC TCGACGTTTG AAGACTATCA AGGAGAACAT CCTCAAACTG GACGGCATGA TTGACACACT GTTCGAATAC TACGCACCAC CCTTCACATC AGGCACCCTT GACGACAAGG AAAATGCTCT CGACCTGCTC CTCAGCCATT TCTCAACTAT CATTCTACCC ACCTACCGCT CTCGCCATTC GCAATTCCTC CTTTTTCACT TCTCACAATC CTCACCAATC CTGGTCGACC GCTTCGCGGC CACGTGCGTC CAGCTCATCT TCAACAAAGC GCAGCCCGCC ATTCTGCGCC AATCCGCGGC CGCGTATCTC GCCAGCTTCG TTGCTCGTGG CGCCCACATC TCCAGCGAGG TTGTCCGCGA CGTCTTCGAC CTCCTTGGCA CACACCTCAA CAATCTTCGT CTTGATTATG AGCCCTCCTG CCGCGGGCCT GACCTCCGTC GCTTCGGGCC CTTCTACTCA ACCGCCCAAG CCCTTCTCTA CATATTCTGC TTTCGCTGGC GCGACCTGAC AACAGCCGCA ATCGAAGGAG ACACACCCGA ACAAATCGAC GAACTCGAAC CCGAAGACAT CACCTTTCCC CCTTCCATCC GAGATGTCCT CCACAAAGCC ATCCTTTCCA AACTCAACCC TCTCAAAGTC TGCTCCCCGG CCATCGTATC CCAATTCGCC CGCATGTCAC AACACCTCAA TTTCATCTAC GTCTTTACCA TCCTTGAGAC AAACAAGCGT CTTCGCATGT CTACATATCG CAACATCGCA GCCCTCTCAG ATCCCCGCTA TAGCCATGTC GAGCGTGAGA CCCGCGCCGG CGACGACTTG GGCTACCAGC TAGACGCTTA CTTTCCGTTC GACCCGTATC AGCTGCCCCG GAGTCGAAGA TGGTTGGAGG GCGATTATGT TGAATGGCGT GGGATTCCTG GTCTTGATGA TCGTGATGAT GACGATGATA GTGATGATCT TGAAGAGCTC TCCGATGATG AAGATGACCT GAGCGATGGG ACGGAAACAG ATCATGAATA G
|
Protein sequence | MEEMDLSLSP SSSIASDADG QPSPRKKTRV QFDEDVEMRE ISYNAETQGG SQWTTDKSAA VVREEVRRAI QRHVSGGDSE AYDRVKEVFS INPRRLDANG MPPSNVPTHT TLKHHLMGLL SNVAALDRSC NGLVQAVLDS EWLGRDESYI KLYIRFLGNL AAAQGSYLGS VLKMLANYMG ELPRGTGRLP GYPHVHPAEA YTRVHMAMRH VLQLVPSGSG SLSQIISSQF PFDTDSAKAN IAYTQNLVKV IRYAPELQAD ILALITEKLV KIDVQIQVDM EDLEDEEGEE VLHAISPEAV MFAEDLDDED DDDNASVVSD ESVEPESRRL KTIKENILKL DGMIDTLFEY YAPPFTSGTL DDKENALDLL LSHFSTIILP TYRSRHSQFL LFHFSQSSPI LVDRFAATCV QLIFNKAQPA ILRQSAAAYL ASFVARGAHI SSEVVRDVFD LLGTHLNNLR LDYEPSCRGP DLRRFGPFYS TAQALLYIFC FRWRDLTTAA IEGDTPEQID ELEPEDITFP PSIRDVLHKA ILSKLNPLKV CSPAIVSQFA RMSQHLNFIY VFTILETNKR LRMSTYRNIA ALSDPRYSHV ERETRAGDDL GYQLDAYFPF DPYQLPRSRR WLEGDYVEWR GIPGLDDRDD DDDSDDLEEL SDDEDDLSDG TETDHE
|
| |