Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3286 |
Symbol | hynL |
ID | 7136378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2961350 |
End bp | 2963107 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643531629 |
Product | [Ni/Fe] hydrogenase, large subunit |
Protein accession | YP_002427639 |
Protein GI | 218665733 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAAGC AAACCGTCGT CGTCGATCCC GTCACCCGCA TCGAGGGACA CCTGCGCATC GAGGCCGAGG TCAAGGATGG CCTCATCACC GGCGCTTCCA GCTCCGGGAC CATGGTGCGC GGCCTGGAAA TCATCCTCCA GGGCCGCGAT CCGCGCGACG CCTGGGCCTT CGCCCAGCGC ATCTGCGGGG TCTGCACCCT GGTGCACGGC ATCGCCTCGG TGCGGGCGGT GGAGGACGCG CTCCATTACC CCATCCCGCA AAACGCCCAG TTGATCCGCA ACCTCATGAT CGCCGCCCAG TTCGTCCACG ATCATGTGAT GCATTTCTAT CAACTGCACG CCCTGGACTG GGTGGATGTA CTCTCCGCCC TCCAGGCGGA TCCCGCCAAA ACGGCCGCGC TGGCCCAATC CCTGAGCGAT TACCCGCGCT CCTCGCCGGG CTACTTCGCC GAGGTGAAGG ACAAGTTCAC CCGTTTCGCG GCCTCCGGAC AGCTCGGCAT CTTCGCCAAC GGCTACTGGG GCAACCCCGC CTACAAGCTC CCGCCCGAGG CCAACCTCAT GGCGCTGGCC CATTACCTGG ACGCCCTGGC CTGGCAGCGG GAGGTGGCCA AGCTCCATGC CGTCTTCGGC GGCAAGAATC CCCATCCCAA CTTCGTGGTG GGTGGCGCCC CCACGGCCAT CAGCGTGTCG CCGGCGGCAT TGCACGACGG CGCGGCGGCG GGGGTCGGGG CCACCGCCGT CAACATGACG GGCCTGGAGA TCGTGCAAAA CGTCATCCGC GAGATCCGCA GCTTCGTGGA TCAGGTCTAC CTGCCCGACA CCCTCGCCAT CGCCGGCTTT TACAAGGACT GGTTCCGCAA GGGGGAAGGG GTGGGCAACT TCCTGACCTA CGGCGAGTTT CCCTCCATGG GCATCAACGA CCTGGACGGC CTCATGATCC CCCGCGGCAT CATCCTCAAC CGGGATCTCT CCACCGTCCA TCCTCTGGAA CTGAGTGCCC CGGACCAGAT CCAGGAGTTC GTGGCCCATT CCTGGTATTC CTATACCGTG GGCAAGGACC AGGGACTCCA TCCCTTTGCG GGACAAACCC ACCTGGACTA TACGGGACCA AAACCGCCCT ACGCGCATCT GGACAGCGAG GCCAGCTATT CCTGGATCAA GTCGCCGCGC TGGAAGGGCA AGGTGATGGA GGTGGGTCCC CTGGCCCGGA TGCTGGTCCT CTATGCCAGC GGCAACCAGG AGGCCCGTAC CCTGGTGGAC AGCAGCCTGC GCAAACTGGG CCTGCCCGTC GAGGCACTCT TCTCCACCAT GGGGCGGACC GCCGCCCGCA CCCTGGAGAG CAAGATCATC GCCGACGCCA TGCAGGGCTG GTACGACCAG CTCATGGCCA ATATCCGCGC CGGTGAACTC GAAACCTTCA ACCCGGCCCT CTGGGAACCC TCCACCTGGC CCGCCGAGGC GCGCGGGGTG GGTTTCATGG AGGCACCCCG TGGTGCCCTG GCCCATTGGG TGGTCATCAA GGACGGTCTC ATCGACAACT ACCAGGCGGT GGTACCCAGC ACCTGGAATG CCGGCCCGCG GGATGCCGCC GGGCAGGACG GCCCCTACGA GGCGGCGCTC AAAGGCACCG AACTCCCTGA CCCCGCCCAG CCCCTGGAGA TCCTCCGTAC CATCCACAGC TTCGATCCCT GCATCGCCTG CGCCGTCCAT CTGGTGGACC CGACAGGGGA GGAACTGTTG CAGGTCAAGG TATGCTGA
|
Protein sequence | MAKQTVVVDP VTRIEGHLRI EAEVKDGLIT GASSSGTMVR GLEIILQGRD PRDAWAFAQR ICGVCTLVHG IASVRAVEDA LHYPIPQNAQ LIRNLMIAAQ FVHDHVMHFY QLHALDWVDV LSALQADPAK TAALAQSLSD YPRSSPGYFA EVKDKFTRFA ASGQLGIFAN GYWGNPAYKL PPEANLMALA HYLDALAWQR EVAKLHAVFG GKNPHPNFVV GGAPTAISVS PAALHDGAAA GVGATAVNMT GLEIVQNVIR EIRSFVDQVY LPDTLAIAGF YKDWFRKGEG VGNFLTYGEF PSMGINDLDG LMIPRGIILN RDLSTVHPLE LSAPDQIQEF VAHSWYSYTV GKDQGLHPFA GQTHLDYTGP KPPYAHLDSE ASYSWIKSPR WKGKVMEVGP LARMLVLYAS GNQEARTLVD SSLRKLGLPV EALFSTMGRT AARTLESKII ADAMQGWYDQ LMANIRAGEL ETFNPALWEP STWPAEARGV GFMEAPRGAL AHWVVIKDGL IDNYQAVVPS TWNAGPRDAA GQDGPYEAAL KGTELPDPAQ PLEILRTIHS FDPCIACAVH LVDPTGEELL QVKVC
|
| |