Gene AFE_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3251 
Symbolgap 
ID7135346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp2927681 
End bp2928697 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content61% 
IMG OID643531594 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002427604 
Protein GI218665917 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.870744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGC GTATTGGTAT TAACGGCTAT GGGCGTATCG GACGGAACAT CCTGCGGGCC 
GTCTATGAGG CGGACCGCAC CGCCGAAGTT CAGATTGTCG CGGTCAATGA CCTGGGCAGC 
CCCGAAACCA ACGCCCACCT GACACAGTAT GATTCCGTGC ATGGCAGATT TCCTTTCCCG 
GTGAACGTTG ACGACGGCGA CATGCTGATC GGCGACGACC GGGTCAAGGT GCTTGCCGAA 
CGCGATCCTT CCAAGCTGCC CTGGGGCGAT CTGGGCGTGG ACGTGGTGCT GGAGTGCACC 
GGCTTCTTTG CCTCCCGCGA AAAGGCGGCC CTGCACCTCA AGGGCGGCGC CAAGAAAGTG 
CTGATCTCCG CACCGGCAAA AGATGCGGTC GACCTCACCG TCGTCTACGG CGTCAACCAC 
CAGTTGCTCG ACCCCGCCAA GCACCACATC GTCTCCAACG GCTCCTGCAC CACCAACTGC 
CTCGCACCCC TGGCCAAGAC CCTTAATGAT CTCGCCGGCA TCGAGGCGGG GACCATGAAC 
ACCATCCACT CCATGACCAA TGATCAGCGC ATCATCGATG TCTATCACGA AGACCTGCGC 
CGTGCCCGCG CTGCCGGCAT GAGCATGATC CCCACCAGCA CTGGTGCCGC CAAGGCCATC 
GGCCTGGTAC TGCCGGAGCT GGCAGGCAAG CTGGACGGCT TCGCTATCCG CGTGCCCACG 
CATAACGTCT CCCTCGTTGA CCTCACCTGT ATCGTCAACA AGGAGGTCTC CGTCGATGAA 
ATCCACGCCG CCATGAAAGC AGCCAGCCAA GGCGCGCTCA AGGGTGTCTA CGGCTACAAC 
GACAAGCCTC TGGTCTCCAT CGACTTCAAC CACAATCCGC ACTCCTCCAC CTATGAGTCC 
TCACTGACCA AGGTCAAGGG CAAGCTGGTC AAGGTCTGCT CCTGGTACGA CAACGAGTGG 
GGTTTCTCCA ATCGTATGGT GGATACCGCC CTCGCCATGA TGGGTCAGGC CCGCTGA
 
Protein sequence
MALRIGINGY GRIGRNILRA VYEADRTAEV QIVAVNDLGS PETNAHLTQY DSVHGRFPFP 
VNVDDGDMLI GDDRVKVLAE RDPSKLPWGD LGVDVVLECT GFFASREKAA LHLKGGAKKV 
LISAPAKDAV DLTVVYGVNH QLLDPAKHHI VSNGSCTTNC LAPLAKTLND LAGIEAGTMN 
TIHSMTNDQR IIDVYHEDLR RARAAGMSMI PTSTGAAKAI GLVLPELAGK LDGFAIRVPT 
HNVSLVDLTC IVNKEVSVDE IHAAMKAASQ GALKGVYGYN DKPLVSIDFN HNPHSSTYES 
SLTKVKGKLV KVCSWYDNEW GFSNRMVDTA LAMMGQAR