Gene AFE_3207 details

Gene Information

• Locus tag: AFE_3207
• Symbol: atpF
• ID: 7136867
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 2891018
• End bp: 2891497
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643531552
• Product: ATP synthase F0, B subunit
• Protein accession: YP_002427563
• Protein GI: 218667443
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0472132
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCAG TAGGTATCAA TGGAACGCTG ATCGTACAGT TGGTCACATT CGTCATCTTG 
GTGGCCTTGC TGTACAAGTA TATGTATGGT CCTTTGCGTA AGGTCATGGA TGACCGCCGC 
GCCAAAATCG CCGATGGCCT GGCGGCAGCG GAACGCGGCA AGGAAGAAAT GGCCCTGGCG 
CAGAAGCGTG CGACGGAGCT GCTCCGCGAA GCCAAGGACA AGGCGGCAGA AATCATCGCC 
AACGCCGAGC GTCGTGGTGT GGAGTTGCGT GAGGAGGCGC AGGGTAAGGC GCGCGAGGAA 
GCCGATCGGA TCATCGCCAG CGCGCGTGCC GAAATCGACG TCGAAACCAA CCGGGCGCGC 
GAAGTGCTGC GTGGGCAGGT GGTGGAACTC GTAGTGAATG GCACCCAGCG CATTCTGCAT 
CGCGAAATCG ACGATCAGAC CCACCGCGAC ATCATCGACC GTATGGTCGG CCAATTGTGA 

 

Protein sequence

MNPVGINGTL IVQLVTFVIL VALLYKYMYG PLRKVMDDRR AKIADGLAAA ERGKEEMALA 
QKRATELLRE AKDKAAEIIA NAERRGVELR EEAQGKAREE ADRIIASARA EIDVETNRAR 
EVLRGQVVEL VVNGTQRILH REIDDQTHRD IIDRMVGQL